DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9934 and AT5G15400

DIOPT Version :9

Sequence 1:NP_001162967.1 Gene:CG9934 / 34699 FlyBaseID:FBgn0032467 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_568313.2 Gene:AT5G15400 / 831392 AraportID:AT5G15400 Length:1038 Species:Arabidopsis thaliana


Alignment Length:969 Identity:259/969 - (26%)
Similarity:460/969 - (47%) Gaps:140/969 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 YLIRCYQNYQTEC----SRKTPLTQPALQLAFEQVMRMTVLVLTDRIY---QNLNGHMDQ----- 404
            |||.|::....|.    |.|....:..:::..:|..::.|...  ||:   .::.|:.|:     
plant    81 YLIGCHRRAYDESKKIQSMKDKNLRSEMEIVTKQAKKLAVSYC--RIHLGNPDMFGNSDKPSGGL 143

  Fly   405 ---------SALLDLMYMAKVSEPFLIDLIAHTHQDREA-------------FDTIFSQVLRGLF 447
                     |.:|.|:: |:|....| |:...:....:|             ||::.| :|:.|:
plant   144 DNRLKKRNVSPVLPLIF-AEVGSGSL-DMFGASSSGVQAPPGFLDEFFKDSDFDSLDS-ILKELY 205

  Fly   448 AGMQRNICTSKISV-----QQIEWLSKLVVIKVGSVRPIADLVSRQPNFLPPICTKISGREIVKC 507
            ..::..:.  .:||     ..:..|..||.:.||:    ..|||.:  :..|....::||.:...
plant   206 EDLRSTVI--NVSVLGDFQPPLRALKYLVSLPVGA----KSLVSHE--WWVPRGAYMNGRAMELT 262

  Fly   508 SFLGPFLSVSLFAEENI----------KFAEFTTKNKLEDASS-SRLRWELHSMRTNMHVVFHSL 561
            |.||||..:|...:..:          .|:|.:.:...:..|| |.::..::.:.:.:|.|...|
plant   263 SILGPFFHISALPDNTLFKSQPDVGQQCFSEASERRPADLLSSFSTIKNFMNILYSGLHDVLMIL 327

  Fly   562 CVNASSRPKTLEYIASILRHNDRRVQFASDEKLLARDGFMINLMSVLQQLSVKI------KLDRI 620
            ..:..:|.:.|:::|.::..|..|.....|....|..|..:||.:|:.:|....      |.|:|
plant   328 LKSTDTRERVLQFLAEVINANASRAHIQVDPVSCASSGMFVNLSAVMLRLCEPFLDPHLTKRDKI 392

  Fly   621 EPNFHYYKNSLVNIEQDTKIRYSEEEYRNFLARD-----------------FSQPVENTN----- 663
            :|.:.:..:.| .:...|.:..|.||...::.:|                 ..|..|.|:     
plant   393 DPKYAFCGHRL-KLSDLTALHASSEEVTEWIGKDAMANANDAGRENGNESRLLQSKEATSSSSNA 456

  Fly   664 ------------FQTQCWFLTLQAHHLGYLPAIQRYRQKVRAIKELQKLIDELDRTKSHWMNSRY 716
                        |..:|:|:|.:..:||.|.|:..::...:.|...:   |.|...|:  |..:.
plant   457 SGQNAKSATKYTFICECFFMTARVLNLGLLKALSDFKHLAQDISRGE---DNLATLKA--MRDQA 516

  Fly   717 ANRNNQFK-ERWEKQLRKLNRSKTCCEITLL-DPGLLQRCTEFYSTVCEFMLYQFEGRPIEGPFI 779
            .:...:.. .|.||:|...::.|.|.|..:| |...:||...||..:..:::      .:.|.| 
plant   517 PSPQLELDISRMEKELELSSQEKLCHEAQILRDGDFIQRALSFYRLMVVWLV------GLVGGF- 574

  Fly   780 SKLPVQQLLPTDAFSALPEWYIDDIAEFILFTMQHANMDIRQGID----HSIITWLLTCVCASHL 840
             |:|:....|.: ||.:||.:::|..|.::|..:     |.:.:|    ...:.:::..:.:...
plant   575 -KMPLPSTCPME-FSCMPEHFVEDAMELLIFASR-----IPKALDGVPLDDFMNFIIMFMASPEY 632

  Fly   841 IKNPYVTAKLVEVMFVFSLKPANSVNAA---MWNHELAQNALVSSLMRFYVDVETTGQSTEFYDK 902
            ::|||:.||:|||:..:..:.::|.:|.   ...|:|:...||.:|::.|||:|.||..|:||||
plant   633 VRNPYLRAKMVEVLNCWMPRSSSSSSATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDK 697

  Fly   903 FTIRYHISHLFKSMWENPIHRQA--VICESRVGNQFVKFVNMLMNDTTFLLDECLENLKRIHQTQ 965
            |.||::|:.|.:.:|:.|.||.|  .|.:......::.|:|.|:||:.:||||.|..:..|.|.:
plant   698 FNIRHNIAELLEYLWQVPSHRNAWRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIE 762

  Fly   966 QLLSDKANLSKMSAEQQQSRLTQLATDERQCRSYLTLARETVDLFHYLTSDIKEPFMRDELVDRL 1030
            ..:|:.|...:...:::|.|.....:.|...|..:.||.|.|.:..:.:.:|..||:..|:|:|:
plant   763 ADMSNTAEWEQRPTQERQERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERV 827

  Fly  1031 SSMLNFNLKQLAGPKCNDLKVKNPAKYGWEPRSLLAQIFDIYLHL----DCDRFAEALAADERSF 1091
            ::|||:.|.||.||:...|.:|:|.||.:.|:.||.||..||::|    ..:.|..|:::|.||:
plant   828 ANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSY 892

  Fly  1092 DVQICNEAASRIKRLALRSAVEVERFKALTQRAHEIYVTNLQTEDECADAPDEFKDPLMDTLMSD 1156
            :.|:.|..|..::|:.....: ::.|..|..:|.......|..|....:.||||.||:..|||.|
plant   893 NEQLFNAGADVLRRIGEEGRI-IQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRD 956

  Fly  1157 PVVLPSGTV-MDRAIITRHLLNSCTDPFNRQPLTEDMLVANIELKQRIDAWRKEQRGKR 1214
            ||:|||..: :||.||.||||:...|||||..||.|||:.:||||.:||.:.|..:.|:
plant   957 PVILPSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSKK 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9934NP_001162967.1 Ufd2P_core 510..1124 CDD:287392 175/679 (26%)
U-box 1141..1211 CDD:252675 40/70 (57%)
AT5G15400NP_568313.2 Ufd2P_core 265..924 CDD:371035 175/679 (26%)
RING-Ubox_UBE4A 943..1012 CDD:319571 39/68 (57%)
U-box domain, a modified RING finger 947..985 CDD:319571 21/37 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 79 1.000 Domainoid score I3030
eggNOG 1 0.900 - - E1_COG5113
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H107623
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53881
OrthoDB 1 1.010 - - D194967at2759
OrthoFinder 1 1.000 - - FOG0004816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101833
Panther 1 1.100 - - LDO PTHR13931
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3397
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.790

Return to query results.
Submit another query.