DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yip1d1 and AT3G52760

DIOPT Version :9

Sequence 1:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_190844.1 Gene:AT3G52760 / 824442 AraportID:AT3G52760 Length:257 Species:Arabidopsis thaliana


Alignment Length:247 Identity:76/247 - (30%)
Similarity:127/247 - (51%) Gaps:38/247 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QASVPPNYDASYAQPPSQG------------LG--------GFYDPTAYTDTSYGQDKSGKSAAG 85
            |..||   .|.| |||.|.            :|        |.:|.|..:..|:|:         
plant    26 QRRVP---TAPY-QPPRQSSASSSIPFIPFEIGSAAVSMPAGPFDGTIASSASFGR--------- 77

  Fly    86 GGAGNEFDDEPPLLEELGINPNHIFQKTLAVLNPLRGTDQQILQDTDMAGPLVFCLTLGGFLLLS 150
             |....|:||.|||:||||:|:.|::||.::|||.| .:|.:.:|:|::||:...|.|..|.||:
plant    78 -GVSASFEDEEPLLDELGIHPDQIWKKTRSILNPFR-INQTVHKDSDLSGPIFLYLALCLFQLLA 140

  Fly   151 GKVTFSYIYGIGVMGCIFFYCLLSLMVSRS-QVTFGAVASVLGYCLLPMVVLSGINILITI-QGT 213
            ||:.|..|.|..|:..||.|.:.:::..|: .:......|::||.|||:|:||.:::.:.. .|.
plant   141 GKIQFGVILGWVVVSSIFLYIVFNMLAGRNGNLNLHTCTSLVGYSLLPVVILSAVSLFVPQGAGP 205

  Fly   214 LGLIVSGISIFWCAISASKLFAT-AFSMDHQQLLIAYPCAVLYGGFALITIY 264
            :..::....:.|...:.|.|..: |...:..:.||:|.|.::|..|:|:.|:
plant   206 VRFVLGAAFVLWATRACSNLVVSLADGGEEHRGLISYACFLIYTLFSLLVIF 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yip1d1NP_609596.1 Yip1 <95..264 CDD:304430 57/171 (33%)
AT3G52760NP_190844.1 Yip1 61..257 CDD:419731 65/206 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 86 1.000 Domainoid score I2790
eggNOG 1 0.900 - - E1_COG5080
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56969
Inparanoid 1 1.050 123 1.000 Inparanoid score I1954
OMA 1 1.010 - - QHG54466
OrthoDB 1 1.010 - - D1457080at2759
OrthoFinder 1 1.000 - - FOG0001876
OrthoInspector 1 1.000 - - otm2709
orthoMCL 1 0.900 - - OOG6_101570
Panther 1 1.100 - - O PTHR21236
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1236
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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