DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yip1d1 and Yipf6

DIOPT Version :9

Sequence 1:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_006528400.1 Gene:Yipf6 / 77929 MGIID:1925179 Length:253 Species:Mus musculus


Alignment Length:235 Identity:57/235 - (24%)
Similarity:95/235 - (40%) Gaps:42/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PPNYDASYAQPPSQGLGGFYDPTAYTDTSYGQD--KSGKSAAGGGAGNEFDDEPPLLEELG---- 103
            |...:|:.::|...||         :|.|..||  ..|:......|..:..|...|.|.:.    
Mouse    25 PGEQEAAASKPLFAGL---------SDVSISQDIPIEGEITIPSRARAQEHDSSTLNESIRRTIM 80

  Fly   104 INPNHIFQKTLAVLNPLRGTDQQILQDTDMAGPLVFCLTLGGFLLLS--------GKVTFSYIYG 160
            .:...:.:|.:.||.|.:  ...:|:|.|:.|||:.|:||...|..|        |...|:.::.
Mouse    81 RDLKAVGRKFMHVLYPRK--SNALLRDWDLWGPLILCVTLALMLQKSSIDGKNDGGGPEFAEVFV 143

  Fly   161 IGVMGCIFFYCLLSLMVSRSQVTFGAVASVLGYCLLPMVVLSGINILITIQG------TLGLIVS 219
            |...|.:..  .|:..:....::|.....|||||:||:.:...|..|:.:.|      .:.|.|.
Mouse   144 IIWFGAVTI--TLNSKLLGGNISFFQSLCVLGYCILPLNIAMLICRLLLLAGQGPINFMIRLFVV 206

  Fly   220 GISIFWCAISASKLFATAFSMDHQ----QLLIAYPCAVLY 255
            .:...|..::     :|||..|.|    :.|..||..:.|
Mouse   207 LLMFAWSVVA-----STAFLADSQPPNRKALAVYPVFLFY 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yip1d1NP_609596.1 Yip1 <95..264 CDD:304430 45/183 (25%)
Yipf6XP_006528400.1 Yip1 19..249 CDD:389810 57/235 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5080
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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