DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yip1d1 and yipf5

DIOPT Version :9

Sequence 1:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001007977.1 Gene:yipf5 / 493343 XenbaseID:XB-GENE-977461 Length:256 Species:Xenopus tropicalis


Alignment Length:275 Identity:125/275 - (45%)
Similarity:176/275 - (64%) Gaps:30/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQFGGPN-DFYGSAPSAD-----ASYNFDMPEFGQELNFQTFDNTQASVPPNYDASYAQPPSQG 59
            ||.|...| |||.::.|.|     .:||....:..::..:..:......:||.. .:..||.:  
 Frog     1 MSNFDNFNTDFYQTSYSIDDQSQGYNYNAGGAQHSKQYAYDPYSQQGGFIPPEM-MNQQQPYT-- 62

  Fly    60 LGGFYDPT-----AYTDTSYGQDKSGKSAAGGGAGNEFDDEPPLLEELGINPNHIFQKTLAVLNP 119
             |..|.||     |.||:.|              |:.||||||||||||||.:||:||||.||:|
 Frog    63 -GQIYQPTQTYTPAATDSVY--------------GSTFDDEPPLLEELGINFDHIWQKTLTVLHP 112

  Fly   120 LRGTDQQILQDTDMAGPLVFCLTLGGFLLLSGKVTFSYIYGIGVMGCIFFYCLLSLMVSRSQVTF 184
            |:..|..|:.:||:|||:||||..|..|||:||:.|.|:|||..:||:..||||:|| |.:.|:|
 Frog   113 LKVADGNIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMYCLLNLM-SMTGVSF 176

  Fly   185 GAVASVLGYCLLPMVVLSGINILITIQGTLGLIVSGISIFWCAISASKLFATAFSMDHQQLLIAY 249
            |.|:||||||||||::||...::.::||.||::::.:.|.||:.||||:|.:|.:||.||:|:||
 Frog   177 GCVSSVLGYCLLPMIILSSFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQVLVAY 241

  Fly   250 PCAVLYGGFALITIY 264
            |||:|||.||||:::
 Frog   242 PCALLYGVFALISVF 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yip1d1NP_609596.1 Yip1 <95..264 CDD:304430 98/168 (58%)
yipf5NP_001007977.1 Yip1 <88..256 CDD:389810 98/168 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 164 1.000 Domainoid score I3888
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56969
Inparanoid 1 1.050 232 1.000 Inparanoid score I3344
OMA 1 1.010 - - QHG54466
OrthoDB 1 1.010 - - D1457080at2759
OrthoFinder 1 1.000 - - FOG0001876
OrthoInspector 1 1.000 - - otm48591
Panther 1 1.100 - - O PTHR21236
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1888
SonicParanoid 1 1.000 - - X1236
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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