DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yip1d1 and yipf6

DIOPT Version :9

Sequence 1:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001002096.1 Gene:yipf6 / 415186 ZFINID:ZDB-GENE-040625-76 Length:240 Species:Danio rerio


Alignment Length:204 Identity:56/204 - (27%)
Similarity:96/204 - (47%) Gaps:47/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 AGNEFD--DEP---PLLEELGINPNHIFQKTLAVLNPLRGTDQQILQDTDMAGPLVFCLTLGGFL 147
            |.|:|.  |||   .:|.:|    ..:.||.:.|:.|.:.:  .:|:|.|:.|||:.|:||.  |
Zfish    50 ADNDFSTLDEPVKDTILRDL----RAVGQKFVHVMYPKKSS--ALLRDWDLWGPLLLCVTLA--L 106

  Fly   148 LL---------SGKVTFSYIYGIGVMGCIFFYCLLSLMVSR---SQVTFGAVASVLGYCLLPMVV 200
            :|         .|:..|:.::.|     |:|..::..:.|:   ..::|.....|||||:||:.|
Zfish   107 MLQGGSADSEEDGRPQFAEVFVI-----IWFGSVIITLNSKLLGGTISFFQSLCVLGYCILPLTV 166

  Fly   201 LSGINILITIQGT------LGLIVSGISIFWCAISASKLFATAFSMDHQ----QLLIAYPCAVLY 255
            ...:..::.:.|:      :.|||...|..|     |...:|||..|.|    :.|:.||..:.|
Zfish   167 AMIVCRIVLLGGSGVVSFAVRLIVVTASFSW-----STFASTAFLADSQPTNRKALVVYPVFLFY 226

  Fly   256 G--GFALIT 262
            .  |:.::|
Zfish   227 FVIGWMILT 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yip1d1NP_609596.1 Yip1 <95..264 CDD:304430 52/195 (27%)
yipf6NP_001002096.1 Yip1 <57..234 CDD:304430 52/194 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5080
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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