DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yip1d1 and yipf5

DIOPT Version :9

Sequence 1:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_956589.1 Gene:yipf5 / 393265 ZFINID:ZDB-GENE-040426-1057 Length:257 Species:Danio rerio


Alignment Length:277 Identity:133/277 - (48%)
Similarity:180/277 - (64%) Gaps:33/277 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQFGGPN-DFYGSAPSAD----ASY---NFDMP--EFGQELNFQTFDNTQASVPPNYDAS--YA 53
            ||.|...| |||.|:.|.|    ..|   |.|.|  .:||      :|.:|   |..|.|:  ..
Zfish     1 MSGFDNFNTDFYQSSYSVDDQNQGGYGYSNTDEPYKPYGQ------YDYSQ---PVGYSAAPGMM 56

  Fly    54 QPPSQGLGGFYDPT-AYTDTSYGQDKSGKSAAGGGAGNEFDDEPPLLEELGINPNHIFQKTLAVL 117
            ||.....|..|.|| |:|.||   .:|..|::       |:||||||||||||.:||:||||..|
Zfish    57 QPQQPYTGQIYQPTPAFTPTS---SQSMYSSS-------FEDEPPLLEELGINFDHIWQKTLTAL 111

  Fly   118 NPLRGTDQQILQDTDMAGPLVFCLTLGGFLLLSGKVTFSYIYGIGVMGCIFFYCLLSLMVSRSQV 182
            :||:.:|..|:.:||:|||:||||..|..|||:||:.|.|:|||..:||:..|.||:|| |.:.|
Zfish   112 HPLKASDGSIMNETDLAGPMVFCLAFGATLLLTGKIQFGYVYGISAIGCLGMYSLLNLM-SMTGV 175

  Fly   183 TFGAVASVLGYCLLPMVVLSGINILITIQGTLGLIVSGISIFWCAISASKLFATAFSMDHQQLLI 247
            :||.||||||||||||::||...::.::||.:|:|::...|.||::||||:|.:|.:||.||||:
Zfish   176 SFGCVASVLGYCLLPMIILSSFGVIFSLQGIMGIILTAAIIGWCSLSASKIFISALAMDGQQLLV 240

  Fly   248 AYPCAVLYGGFALITIY 264
            |||||:|||.||||:::
Zfish   241 AYPCALLYGVFALISVF 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yip1d1NP_609596.1 Yip1 <95..264 CDD:304430 98/168 (58%)
yipf5NP_956589.1 Yip1 <89..257 CDD:304430 98/168 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581896
Domainoid 1 1.000 163 1.000 Domainoid score I3923
eggNOG 1 0.900 - - E1_COG5080
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56969
Inparanoid 1 1.050 236 1.000 Inparanoid score I3358
OMA 1 1.010 - - QHG54466
OrthoDB 1 1.010 - - D1457080at2759
OrthoFinder 1 1.000 - - FOG0001876
OrthoInspector 1 1.000 - - otm25876
orthoMCL 1 0.900 - - OOG6_101570
Panther 1 1.100 - - O PTHR21236
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1888
SonicParanoid 1 1.000 - - X1236
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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