DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-3 and atp6v1a

DIOPT Version :9

Sequence 1:NP_609595.1 Gene:Vha68-3 / 34695 FlyBaseID:FBgn0032464 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_001007512.1 Gene:atp6v1a / 493238 XenbaseID:XB-GENE-479548 Length:617 Species:Xenopus tropicalis


Alignment Length:608 Identity:444/608 - (73%)
Similarity:515/608 - (84%) Gaps:3/608 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 EEEEEATMGRIFGVSGPVVNAEEMAGAAMYELVRVGHSQLVGEIIRLEGDMATIQVYEDTSGVSV 197
            :||.|:..|.:.|||||||.|..||||||||||||||.:|||||||||||||||||||:||||.|
 Frog    11 DEERESQFGYVHGVSGPVVTASNMAGAAMYELVRVGHCELVGEIIRLEGDMATIQVYEETSGVCV 75

  Fly   198 GDPVYQTGKPLSVELGPGIMGSIFDGIQRPLRSISELTNSIYVPKGIDTPSLPRNIAYEFTPGK- 261
            ||||.:|||||||||||||||||||||||||:.||:.|.|||:|:||:..:|.::|.:||.|.| 
 Frog    76 GDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDISDSTQSIYIPRGINVSALSKDIKWEFNPSKS 140

  Fly   262 LKIDALITGGDIYGSVFENSMMHDHRLILPPRTKGRIRWLAPPGNYCVDEVIVETEFNDEITKHT 326
            :::.:.||||||||:|.|||::. |:::||||.:|.:.::||||:|...:|::|.||.....|.|
 Frog   141 IRVGSHITGGDIYGAVMENSLIR-HKIMLPPRNRGTVTYIAPPGHYDTSDVVLELEFEGVKDKFT 204

  Fly   327 MLQVWPVRRCRPVEDKLPSNSPLLTGQRVLDAFFPCVQGGTTAIPGAFGCGKTVISQALSKYSNS 391
            |:||||||..|||.:|||:|.|||||||||||.||||||||||||||||||||||||:|||||||
 Frog   205 MVQVWPVRSIRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNS 269

  Fly   392 DVIIYVGCGERGNEMSEVLRDFPQLEVEVNGTMESIMKRTALVANTSNMPVAAREASIYTGITLS 456
            |||||||||||||||||||||||:|.:||:|..||||||||||||||||||||||||||||||||
 Frog   270 DVIIYVGCGERGNEMSEVLRDFPELTMEVDGKTESIMKRTALVANTSNMPVAAREASIYTGITLS 334

  Fly   457 EYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADAGYPAYLGARLASFYERAGLVKCLGSPD 521
            |||||||||||||||||||||||||||||||||||||:||||||||||||||||||.|||||:|:
 Frog   335 EYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPE 399

  Fly   522 REGSVSIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLQSYSKYMRTLDTY 586
            |||||||||||||||||||||||||||.||||||||||||||||||||||||.|||||.|.||.|
 Frog   400 REGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYTRALDEY 464

  Fly   587 YEESNPEFTHLRAKAKKVLQEEDDLAEIVQLVGKSSLNEEDKITLEVAKMLKDDFLQQNSYSQYD 651
            |::...||..||.|||::||||:|||||||||||:||.|.|||||||||::||||||||.|:.||
 Frog   465 YDKHFQEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYD 529

  Fly   652 AYCPFFKTIGMLKNMMTFYDAAILSVQNTADNEARVTWGLIRIKAANILYELSTMKFIDP-KLGE 715
            .:|||:||:|||.||:.|||.|..:|..||.::.::||.:||.....|||.|::|||.|| |.||
 Frog   530 RFCPFYKTVGMLYNMIAFYDMARRAVDTTAQSDNKITWSIIREHMGEILYRLTSMKFKDPVKEGE 594

  Fly   716 ATVLESMNKLHDNILSTFREIED 738
            |.:.....:|.:::.:.||.:||
 Frog   595 AKIKADYAQLLEDMQNAFRSLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-3NP_609595.1 V-ATPase_V1_A 141..729 CDD:273411 437/589 (74%)
ATP-synt_ab_N 143..205 CDD:280947 50/61 (82%)
V_A-ATPase_A 207..579 CDD:238554 296/372 (80%)
ATP-synt_ab_C 597..738 CDD:278722 80/141 (57%)
atp6v1aNP_001007512.1 V-ATPase_V1_A 17..609 CDD:273411 437/592 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I6554
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60789
OrthoDB 1 1.010 - - D160349at33208
OrthoFinder 1 1.000 - - FOG0001869
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1565
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.030

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