DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-3 and Vha68-2

DIOPT Version :9

Sequence 1:NP_609595.1 Gene:Vha68-3 / 34695 FlyBaseID:FBgn0032464 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_001246015.1 Gene:Vha68-2 / 45012 FlyBaseID:FBgn0263598 Length:614 Species:Drosophila melanogaster


Alignment Length:608 Identity:457/608 - (75%)
Similarity:534/608 - (87%) Gaps:2/608 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 DEEEEEATMGRIFGVSGPVVNAEEMAGAAMYELVRVGHSQLVGEIIRLEGDMATIQVYEDTSGVS 196
            |:||.|:..||:|.||||||.||.|:|:|||||||||:.:|||||||||||||||||||:||||:
  Fly     8 DDEERESKYGRVFAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETSGVT 72

  Fly   197 VGDPVYQTGKPLSVELGPGIMGSIFDGIQRPLRSISELTNSIYVPKGIDTPSLPRNIAYEFTPGK 261
            |||||.:|||||||||||||||||||||||||:.|:|||.|||:|||::.|||.|..::||.|..
  Fly    73 VGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVASWEFNPLN 137

  Fly   262 LKIDALITGGDIYGSVFENSMMHDHRLILPPRTKGRIRWLAPPGNYCVDEVIVETEFNDEITKHT 326
            :|:.:.|||||:||.|.||::: .|::|:.||.||.:|::||.|||.||:|::||||:.||||||
  Fly   138 VKVGSHITGGDLYGLVHENTLV-KHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEFDGEITKHT 201

  Fly   327 MLQVWPVRRCRPVEDKLPSNSPLLTGQRVLDAFFPCVQGGTTAIPGAFGCGKTVISQALSKYSNS 391
            ||||||||:.|||.:|||:|.||||||||||:.||||||||||||||||||||||||||||||||
  Fly   202 MLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNS 266

  Fly   392 DVIIYVGCGERGNEMSEVLRDFPQLEVEVNGTMESIMKRTALVANTSNMPVAAREASIYTGITLS 456
            |||||||||||||||||||||||:|.||::|..||||||||||||||||||||||||||||||||
  Fly   267 DVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLS 331

  Fly   457 EYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADAGYPAYLGARLASFYERAGLVKCLGSPD 521
            ||||||||:||||||||||||||||||||||||||||:||||||||||||||||||.|||||:|:
  Fly   332 EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPE 396

  Fly   522 REGSVSIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLQSYSKYMRTLDTY 586
            |||||||||||||||||||||||||||.||||||||||||||||||||:|||.|||||||.||.:
  Fly   397 REGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDF 461

  Fly   587 YEESNPEFTHLRAKAKKVLQEEDDLAEIVQLVGKSSLNEEDKITLEVAKMLKDDFLQQNSYSQYD 651
            |:::.|||..||.|.|::||||:||:||||||||:||.|.|||||||||:||||||||||||.||
  Fly   462 YDKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYD 526

  Fly   652 AYCPFFKTIGMLKNMMTFYDAAILSVQNTADNEARVTWGLIRIKAANILYELSTMKFIDP-KLGE 715
            .:|||:||:|||:|::.|||.|..||::||.:|.::||.:||....||:|:||:|||.|| |.||
  Fly   527 RFCPFYKTVGMLRNIIDFYDMARHSVESTAQSENKITWNVIREAMGNIMYQLSSMKFKDPVKDGE 591

  Fly   716 ATVLESMNKLHDNILSTFREIED 738
            |.:.....:||:::...||.:||
  Fly   592 AKIKADFEQLHEDLQQAFRNLED 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-3NP_609595.1 V-ATPase_V1_A 141..729 CDD:273411 449/588 (76%)
ATP-synt_ab_N 143..205 CDD:280947 48/61 (79%)
V_A-ATPase_A 207..579 CDD:238554 304/371 (82%)
ATP-synt_ab_C 597..738 CDD:278722 84/141 (60%)
Vha68-2NP_001246015.1 V-ATPase_V1_A 16..606 CDD:273411 449/590 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449905
Domainoid 1 1.000 404 1.000 Domainoid score I135
eggNOG 1 0.900 - - E1_COG1155
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 848 1.000 Inparanoid score I68
Isobase 1 0.950 - 0 Normalized mean entropy S546
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D160349at33208
OrthoFinder 1 1.000 - - FOG0001869
OrthoInspector 1 1.000 - - otm2949
orthoMCL 1 0.900 - - OOG6_100902
Panther 1 1.100 - - P PTHR43607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1565
1211.750

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