Protein Alignment Vha68-3 and Vha55

DIOPT Version :10

• Sequence 1: NP_609595.1
• Gene: Vha68-3 / 34695
• FlyBaseID: FBgn0032464
• Length: 743
• Species: Drosophila melanogaster
• Sequence 2: NP_476908.1
• Gene: Vha55 / 41550
• FlyBaseID: FBgn0005671
• Length: 490
• Species: Drosophila melanogaster
• Alignment Length: 532
• Identity: 125/532 - (23%)
• Similarity: 220/532 - (41%)
• Gaps: 131/532 - (24%)

  Fly   139 TMGRIFGVSGPVVNAEEMAGAAMYELVRVGHSQLV------GEIIRLEGDMATIQVYEDTSGVSV 197
            |...:.||:||:|..:|:......|:|::   :|.      |:::.:.|..|.:||:|.|||:..
  Fly    25 TYKTVSGVNGPLVILDEVKFPKFAEIVQL---RLADGTVRSGQVLEVSGSKAVVQVFEGTSGIDA 86

  Fly   198 GDPVYQ-TGKPLSVELGPGIMGSIFDGIQRPLRSISELTNSIYVPKGIDTPSLPRNIAYEFTPGK 261
            .:.:.: ||..|...:...::|.:|:|..:|            :.||      |..:|.:|.
  Fly    87 KNTLCEFTGDILRTPVSEDMLGRVFNGSGKP------------IDKG------PPILAEDFL--- 130

  Fly   262 LKIDALITGGDIYGSVFENSMMHDHRLILPPRTKGRIRWLAPPGNYCVDEVIVET-----EFNDE 321
                      ||.|....                        |.:....|.:::|     :..:.
  Fly   131 ----------DIQGQPIN------------------------PWSRIYPEEMIQTGISAIDVMNS 161

  Fly   322 ITKHTMLQVWPVRRCRPVEDKLPSNSPLLTGQRVLDAFFPCVQGGTTAIPGAFGCGKTVISQALS 386
            |.:...:.::...       .||.|.  :..|       .|.|.|...:|     ||:|    |.
  Fly   162 IARGQKIPIFSAA-------GLPHNE--IAAQ-------ICRQAGLVKLP-----GKSV----LD 201

  Fly   387 KYSNSDVIIYVGCGERGNEMSEVLRDFPQLEVEVNGTMESIMKRTALVANTSNMPVAAREASIYT 451
            .::::..|::...|..    .|..|.|.| :.|.||:||::    .|..|.:|.|...|..:...
  Fly   202 DHTDNFAIVFAAMGVN----METARFFKQ-DFEENGSMENV----CLFLNLANDPTIERIITPRL 257

  Fly   452 GITLSEYFRDMGY----HVSMMADSTSRWAEALREISGRLAEMPADAGYPAYLGARLASFYERAG 512
            .:|.:|:   :.|    ||.::....|.:||||||:|....|:|...|:|.|:...||:.|||||
  Fly   258 ALTAAEF---LAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAG 319

  Fly   513 LVKCLGSPDREGSVSIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLQSYS 577
            .|:     .|.||::.:..::.|..|.:.|:...|..|.:....:|::|..|:.:|.||.|.|.|
  Fly   320 RVE-----GRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLS 379

  Fly   578 KYMR-------TLDTYYEESNPEFTHLRAKAKKVLQEEDDLAEIVQLVGKSSLNEEDKITLEVAK 635
            :.|:       |...:.:.||..:. ..|..|       |:..:..:||:.:|..:|.:.||...
  Fly   380 RLMKSAIGEGMTRKDHSDVSNQLYA-CYAIGK-------DVQAMKAVVGEEALTPDDLLYLEFLT 436

  Fly   636 MLKDDFLQQNSY 647
            ..:.:|:.|.:|
  Fly   437 KFEKNFISQGNY 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha68-3	NP_609595.1	V-ATPase_V1_A	141..729	CDD:273411	124/530 (23%)
Vha55	NP_476908.1	V-ATPase_V1_B	25..488	CDD:273410	125/532 (23%)