Protein Alignment Vha68-3 and ATPsynbetaL

DIOPT Version :10

• Sequence 1: NP_609595.1
• Gene: Vha68-3 / 34695
• FlyBaseID: FBgn0032464
• Length: 743
• Species: Drosophila melanogaster
• Sequence 2: NP_648836.2
• Gene: ATPsynbetaL / 39761
• FlyBaseID: FBgn0036568
• Length: 622
• Species: Drosophila melanogaster
• Alignment Length: 672
• Identity: 160/672 - (23%)
• Similarity: 257/672 - (38%)
• Gaps: 163/672 - (24%)

  Fly    46 AKKCTCPTCACQRNDHKSNPVPPPPQSR---KPVAEPESPHDTVNDEDSLKDLRRSTDQSH---- 103
            ||..|    ||.|...|..|.....:..   .||..|...|.:::..|. ||.::|.|:..
  Fly     6 AKMAT----ACARIGLKMGPGTGGYRGNYLGNPVVFPRYLHASLSLWDD-KDKKKSGDECEPEPQ 65

  Fly   104 ----KSAHIALEKNEDSGFVIEQVVDTHKYSSDEEEEEATMGRIFGVSGPVV------------N 152
                ..|.:..:|:|......|:..|.   ...:.|.:...|.|..|.|||:            |
  Fly    66 EVCKTDAELVKKKDEAEDECEEKKSDG---GGKKLESKGRKGVIHAVIGPVIDVYFEEEVPEVLN 127

  Fly   153 AEEMAGAAMYELVRVGHSQLVGEIIRLEGDMATIQVYEDTSGVSVGDPVYQTGKPLSVELGPGIM 217
            |.::..|.:..||......|...|:|       ....:.|.|:..|.||..||.|:.|.:|..::
  Fly   128 ALQVQDAPIANLVLEVFHHLGNNIVR-------CVAMDSTEGLRRGQPVLDTGYPIRVAVGKAVL 185

  Fly   218 GSIFDGIQRPLRSISELTNSIYVPKGIDTPSLPRNIAYEFTPGKLKIDALITGGDIYGSVFENSM 282
            |.|.:.:..|:....|:.:..|                                         |.
  Fly   186 GRILNVVGDPIDDRGEVKSDFY-----------------------------------------SF 209

  Fly   283 MHDHRLILPPRTKGRIRWLAPPGNYCVDEVIVETEFNDEITKHTMLQVWPVRRCRPVEDKLPSNS 347
            :|                                   :|..:.|.|.|.|              .
  Fly   210 IH-----------------------------------NEAPELTDLSVKP--------------E 225

  Fly   348 PLLTGQRVLDAFFPCVQGGTTAIPGAFGCGKTVISQALSK---YSNSDVIIYVGCGERGNEMSEV 409
            .|:||.:|:|...|.|:||...:.|..|.||||:...|..   .|:....::||.|||..|.:::
  Fly   226 ILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDL 290

  Fly   410 LRDFPQLEVEVNGTMESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDM-GYHVSMMADST 473
            ..:..:.:|.   ::|....:..||....|.|..||...:.||:|::|||||: |..|.:..|:.
  Fly   291 YHEMIESKVI---SLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNI 352

  Fly   474 SRWAEALREISGRLAEMPADAGYPAYLGARLASFYERAGLVKCLGSPDREGSVSIVGAVSPPGGD 538
            .|:.:|..|:|..|..:|:..||...||..:.:..||.       :..|.||::.|.||..|..|
  Fly   353 FRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI-------TSTRNGSITSVQAVYVPADD 410

  Fly   539 FSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLQSYSKYMRTLDTYYEESNPEFTHLRAKAKK 603
            .|||..:||.|.:.....|.:.:|:...:|:|:.|.|.|   |.||.  :....|..::....:|
  Fly   411 LSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSS---RILDP--DVVGEEHYNVARAVQK 470

  Fly   604 VLQEEDDLAEIVQLVGKSSLNEEDKITLEVAKMLKDDFLQQNSYSQYDAYCPFFKTIGMLKNMMT 668
            .||....|.:|:.::|...|:||||:|:..|:.:: .||.|          ||     .:..:.|
  Fly   471 TLQAYKSLQDIIAILGMDELSEEDKLTVARARKMQ-RFLSQ----------PF-----QVAEIFT 519

  Fly   669 FYDAAILSVQNTADNEARVTWG 690
            .:...::.|:...:...|:..|
  Fly   520 GHPGKLVPVEKCVEGFKRLLNG 541

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha68-3	NP_609595.1	V-ATPase_V1_A	141..729	CDD:273411	137/566 (24%)
ATPsynbetaL	NP_648836.2	AtpD	103..570	CDD:439825	137/567 (24%)