DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-3 and atp6v1al

DIOPT Version :9

Sequence 1:NP_609595.1 Gene:Vha68-3 / 34695 FlyBaseID:FBgn0032464 Length:743 Species:Drosophila melanogaster
Sequence 2:XP_031747187.1 Gene:atp6v1al / 394868 XenbaseID:XB-GENE-22169633 Length:617 Species:Xenopus tropicalis


Alignment Length:608 Identity:440/608 - (72%)
Similarity:519/608 - (85%) Gaps:3/608 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 EEEEEATMGRIFGVSGPVVNAEEMAGAAMYELVRVGHSQLVGEIIRLEGDMATIQVYEDTSGVSV 197
            :||:|:.||.:.|||||||.|.:||||||||||||||::|||||||||||:|||||||:||||.|
 Frog    11 DEEKESMMGFVHGVSGPVVIASQMAGAAMYELVRVGHAELVGEIIRLEGDLATIQVYEETSGVCV 75

  Fly   198 GDPVYQTGKPLSVELGPGIMGSIFDGIQRPLRSISELTNSIYVPKGIDTPSLPRNIAYEFTPGK- 261
            ||||.:|||||||||||||||:|||||||||:.|::||.|||:|:||:..:|.|:|.:||.|.| 
 Frog    76 GDPVLRTGKPLSVELGPGIMGNIFDGIQRPLKDITDLTKSIYIPRGINVTALSRDIKWEFLPDKS 140

  Fly   262 LKIDALITGGDIYGSVFENSMMHDHRLILPPRTKGRIRWLAPPGNYCVDEVIVETEFNDEITKHT 326
            ::..:.:|||||||.|.|||:: .|::::|||:.|.:.::||||||.:.:|::|.:|.....|.|
 Frog   141 IRAGSHVTGGDIYGIVTENSLI-KHKIMVPPRSCGTVTYIAPPGNYDISDVVMELDFEGVKEKLT 204

  Fly   327 MLQVWPVRRCRPVEDKLPSNSPLLTGQRVLDAFFPCVQGGTTAIPGAFGCGKTVISQALSKYSNS 391
            |:||||||:.||..:|||:|.|||||||||||.||||||||||||||||||||||||||||||||
 Frog   205 MVQVWPVRQIRPAAEKLPANYPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQALSKYSNS 269

  Fly   392 DVIIYVGCGERGNEMSEVLRDFPQLEVEVNGTMESIMKRTALVANTSNMPVAAREASIYTGITLS 456
            |||:|||||||||||||||||||:|.:||:|..|:|||||.||||||||||||||||||||||||
 Frog   270 DVIVYVGCGERGNEMSEVLRDFPELTMEVDGKTETIMKRTTLVANTSNMPVAAREASIYTGITLS 334

  Fly   457 EYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADAGYPAYLGARLASFYERAGLVKCLGSPD 521
            ||||||||:||||||||||||||||||||||||||||:||||||||||||||||||.|:|||||.
 Frog   335 EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVRCLGSPR 399

  Fly   522 REGSVSIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLQSYSKYMRTLDTY 586
            |||||||||||||||||||||||||||.||||||||||||||||||||||||.|||||||.||.:
 Frog   400 REGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEF 464

  Fly   587 YEESNPEFTHLRAKAKKVLQEEDDLAEIVQLVGKSSLNEEDKITLEVAKMLKDDFLQQNSYSQYD 651
            ||.:.|:...||.|.|::||||:|||||||||||.||.|.|||||||||::||||||||.||.||
 Frog   465 YERNFPDLVPLRTKVKEILQEEEDLAEIVQLVGKGSLAEADKITLEVAKLIKDDFLQQNGYSAYD 529

  Fly   652 AYCPFFKTIGMLKNMMTFYDAAILSVQNTADNEARVTWGLIRIKAANILYELSTMKFIDP-KLGE 715
            .:|||:||:||::||:.|||.|..:|:.||..|.::||.:||....:|||:||:|||.|| |.||
 Frog   530 RFCPFYKTVGMIQNMIAFYDMARHAVEATAQAENKITWAIIRENLGDILYKLSSMKFKDPVKDGE 594

  Fly   716 ATVLESMNKLHDNILSTFREIED 738
            |.:.....:||:.:.:.||.:||
 Frog   595 AKIKADYAQLHEEMQNAFRSLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-3NP_609595.1 V-ATPase_V1_A 141..729 CDD:273411 432/589 (73%)
ATP-synt_ab_N 143..205 CDD:280947 49/61 (80%)
V_A-ATPase_A 207..579 CDD:238554 290/372 (78%)
ATP-synt_ab_C 597..738 CDD:278722 82/141 (58%)
atp6v1alXP_031747187.1 V-ATPase_V1_A 19..609 CDD:273411 432/590 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I6554
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D160349at33208
OrthoFinder 1 1.000 - - FOG0001869
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1565
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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