DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACXC and phlp-2

DIOPT Version :9

Sequence 1:NP_609593.1 Gene:ACXC / 34689 FlyBaseID:FBgn0040508 Length:1130 Species:Drosophila melanogaster
Sequence 2:NP_001337270.1 Gene:phlp-2 / 185690 WormBaseID:WBGene00009647 Length:1126 Species:Caenorhabditis elegans


Alignment Length:894 Identity:167/894 - (18%)
Similarity:296/894 - (33%) Gaps:263/894 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 ESILLDSILPPQIAKPVQEKIK-SKITQSENS-PDRFQMGPRTTESFMAIQIHPDVSILYADVVN 324
            |.:...|..|..:.||:::|.: .::..|:.. ..|.:....||.:.:..|...||..|  .:.|
 Worm     4 EQLQSTSSSPSTLLKPIEKKSRFLRLYSSDGQRSTRIECDEHTTCAQICQQFSCDVITL--QIGN 66

  Fly   325 YTHLTTTLTVGNLVKVLHDLYGRFDIAASNFKVQRI-KFLGDCYYCVAGLTTPDPDH-------- 380
            | |.....:..:.:.:|.|......::..|.:.:.. |.|.|   .::...:|...|        
 Worm    67 Y-HFRQLKSDTSPLAILQDFCRILTMSDENLETESTSKALED---ILSYTDSPAFRHIFSFFLGR 127

  Fly   381 ----AKCCVSLGI----------SMISNIQEVRA---------------ERGLDI-DMRIGVHSG 415
                ||..::|.|          .:|...|..||               :..|.| :|::.||..
 Worm   128 PRIRAKSTLNLDILSEEVVIRKGKLIHTWQNARAVFYNSNIRLQTKNNQDEALQIRNMKVDVHES 192

  Fly   416 -----------SLLAGIIGEAKLQFDIWGT---DVEIANHLESTGE-----PGYVHVSGRTLSML 461
                       .:...||.:.....:.|.|   .||.:||::::.|     |..:..:...:.:|
 Worm   193 KRGRALRLKDDDVCYLIIFQRPNILEAWLTRAQQVEKSNHVDASDEQLTLIPEQILNNEARVQIL 257

  Fly   462 NPADYTILS--GTQKAQSDPVLQYIHTYLLTGQVARESFITSIGGVRSSSVLEVKSIDRIRSSRP 524
            |....:::|  .|:|:                 :|...:|..:..|.|..|::: |.::|.|. |
 Worm   258 NLRRNSLISRPPTEKS-----------------MAPLGYIDDLYRVHSLQVIDL-SANQILSF-P 303

  Fly   525 SQSSMTDEFREEFRNMPVGGINLN--------SPCCRRTRLDTHKKTQREIGIFCAAFKDSSLEW 581
            .|.::....|:         :||:        |.|....||.....:..::.    ...||..|.
 Worm   304 IQLTLLSHLRQ---------LNLSSNYISSVPSECSNMRRLQYLNLSNNQLD----TLPDSISEL 355

  Fly   582 NYLHQPDFIFKSSMLLAWGIGCCLIYIQIVTNNFS-CTACIVVDLVTFFFLTSLLCLAWYKNVCW 645
            ..|...|..|                     |.|| ...|:       |.||..:         |
 Worm   356 QNLQSLDISF---------------------NQFSQIPPCL-------FHLTLEM---------W 383

  Fly   646 WKSGRYEFRI--YGKYSCMAFHI------------FEKIQH----SVSLRITVYL-GILFSYYAV 691
            ..:|....:|  .|:.......:            .|.|.|    ..|:..||:| .:.|     
 Worm   384 RLAGNNIEKIDRVGEMQIQKIDLRRNVLDTSFRLDIENITHLDLRDNSMISTVHLTNLRF----- 443

  Fly   692 ISLIMLNCDRDMYELSYIESKIYHYEMDRDTCFHPWVFTNMI-SLI----------LGISYTFAR 745
              |.:::|:|  .:||.:       .:..::..|.:...|:: ||:          |.:|:...|
 Worm   444 --LKVIHCER--LQLSSL-------HLSGESLTHVYADHNLLDSLVVMPLPQNLQTLSLSFNHFR 497

  Fly   746 IPFGLKIVISCCETLAYL------LIVFFQFAFIFQHSATTTPFMKAELAHC----LRVCMMLLT 800
               .|...||.|..|.:|      |:...:..|..|...:...|:. |:.|.    ...|:..|.
 Worm   498 ---NLPDWISDCPNLTFLRANNNSLVALPERIFYSQSLRSIFAFIN-EIEHIPDFGEENCLETLI 558

  Fly   801 MYAKE-------------RQSEFNTKMNYKLNVDLQNKQKAADLTNQSIIILLNNILPSHVVDLY 852
            :|..:             |..:.|...|:   ::|......:......|:...||.|..:.|.:.
 Worm   559 LYKNKLSSLPKHFFSILPRLRQLNISSNF---IELLPYFDGSSFCRLQILRCANNYLTENSVPVI 620

  Fly   853 LNSLAKHELYYENYRMVSVMFAMLINFPMN-LPSLRVLNDIITQFDRLLTAYREYYVVEKIKVVG 916
            :|  .||      .:::.:....|.:|..: |.||.:|.|:....:||            .::..
 Worm   621 VN--MKH------LKIIDLSHNRLNSFDDSALSSLELLEDLNLSSNRL------------TRLAD 665

  Fly   917 CTYMAACGLDFNLASNIRQTDHFRNSSLHVEVEHARNHRMTDENYDSDMNNDEVVFIMTTFALDL 981
            |..:..|         ::......|..:||....|.|...|   .|...||..:..:......:|
 Worm   666 CLALLPC---------LQVLRAHSNQLVHVPEFRASNQLHT---IDVSSNNISLGTLQFKAPPNL 718

  Fly   982 MRTLAACNRA--YSSSFFERSLSQGKI-CIGISSGE-----IMAGVVGA 1022
            ......||..  .:.:|.|.:....|: .|.||.|.     ...||.|:
 Worm   719 RHFDVTCNSGDFDTENFPENAKMHSKMNTINISEGSQNLFGFQIGVSGS 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXCNP_609593.1 AC_N <33..285 CDD:292831 6/23 (26%)
CYCc 293..468 CDD:214485 43/232 (19%)
Nucleotidyl_cyc_III 307..466 CDD:299850 40/216 (19%)
CYCc 833..1060 CDD:214485 41/199 (21%)
Nucleotidyl_cyc_III 861..1085 CDD:299850 33/171 (19%)
phlp-2NP_001337270.1 leucine-rich repeat 232..253 CDD:275380 3/20 (15%)
leucine-rich repeat 254..288 CDD:275380 8/50 (16%)
PLN00113 283..>718 CDD:331614 99/541 (18%)
leucine-rich repeat 289..311 CDD:275380 6/23 (26%)
leucine-rich repeat 312..334 CDD:275380 5/30 (17%)
leucine-rich repeat 335..357 CDD:275380 4/25 (16%)
leucine-rich repeat 358..379 CDD:275380 8/48 (17%)
leucine-rich repeat 380..440 CDD:275380 11/68 (16%)
leucine-rich repeat 441..485 CDD:275380 10/59 (17%)
leucine-rich repeat 486..508 CDD:275380 7/24 (29%)
leucine-rich repeat 509..534 CDD:275380 5/24 (21%)
leucine-rich repeat 554..577 CDD:275380 2/22 (9%)
leucine-rich repeat 578..602 CDD:275380 3/26 (12%)
leucine-rich repeat 603..625 CDD:275380 6/23 (26%)
leucine-rich repeat 626..649 CDD:275380 5/22 (23%)
leucine-rich repeat 650..672 CDD:275380 5/33 (15%)
leucine-rich repeat 673..694 CDD:275380 4/20 (20%)
PP2Cc 754..985 CDD:214625 3/14 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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