DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACXC and odr-1

DIOPT Version :10

Sequence 1:NP_609593.1 Gene:ACXC / 34689 FlyBaseID:FBgn0040508 Length:1130 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:1002 Identity:197/1002 - (19%)
Similarity:358/1002 - (35%) Gaps:326/1002 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 YDVISTDILHNLGF-NMMGIFF-----------RIMNDTMVRASFLDRHQFIMEETWLRHALLQE 262
            ||:.|.  .:|:|. ::.|..|           .|:|...|:......:.||:..       |||
 Worm   223 YDIYSA--FYNIGIRSLSGFRFIIVVILNKPPDEILNQPNVKNLLYGSNAFIISP-------LQE 278

  Fly   263 ------SILLDSILPPQIAKPVQEKIKS--------------KITQSENSPDRF---QMGPRTTE 304
                  ||:.|.|  |.:|   .::..:              .:..:|...|.:   ..|...|.
 Worm   279 QYSDAFSIMQDVI--PNLA---DDQFTTFLRIYHACYAYCVGSVNGAETQTDNYHTAMSGKAVTT 338

  Fly   305 SFMAIQIHPDVSIL--YA-DVVNYTHLT--TTLTVGNLVKVLHDLYGRFDIAASNFKVQRIKFLG 364
            .:.........|:|  || ..:|...:|  :.||:.::.|.. |.|..|.::.:.        ..
 Worm   339 KYGTFTFDNSGSVLTNYAVFTINPAEMTFESILTLKSVAKSC-DTYNCFQLSPNK--------TS 394

  Fly   365 DCYYCVAGLTTPDPDHAK-CCVS--------------LGISMISNIQEVRAERGL-DIDMRIGVH 413
            |..:.:..:..||...|| .||:              :.|:::..:::.|.:..: .:..::...
 Worm   395 DLLWTLKDMDPPDDCVAKSSCVNYIPHIIAAVVIVTIIVIAIVIIVKQRRHKLNIYKLTWKVPKE 459

  Fly   414 SGSLLAGIIGEAKLQFDIWGTDVEIANHLESTGEPGYVHVSGRTLSMLNPADYTILSGTQKAQSD 478
            |..::.....:||:|       .|:.|...:|.....:....|..     ..|.:: |||:|:  
 Worm   460 SLKIIVNKNADAKMQ-------RELENRASNTDNAAALTSRRRVF-----GSYALV-GTQRAE-- 509

  Fly   479 PVLQYIHTYLLTGQVARESFITSIGGVRSSSVLEVKSIDRIRSSRPSQSSMTDEFREEFRNMPVG 543
                    |:...|:.:.:|..:             ::|.:.|.:..|.....:|.         
 Worm   510 --------YVQFKQIRKINFPET-------------TLDYLYSLKQLQHDNLAKFY--------- 544

  Fly   544 GINLNSPCCRRTRLDT--HKKT------QREIGI---FCAAF-KDSSLEWNYLHQPDFIFKSSML 596
            ||.:|......|.|.|  .:.|      .|:.|:   |.:|| :|......|||:....:...:.
 Worm   545 GIQVNDDIMTMTILHTLVERGTLEEFCLDRDFGMDDTFKSAFMRDILKGLQYLHKSSIGYHGHLQ 609

  Fly   597 LAWGIGCCLIYIQIVTNNFSCTACIVVDLVTFFFLTSLL-----------------CLAWYKNVC 644
            .:    .|||.|..|..            :|.:.:::.:                 .:.:.:.||
 Worm   610 AS----TCLIDINWVLK------------LTLYGVSNFMSDQLDAENIKVPEQAAHMITYPQYVC 658

  Fly   645 WWKSGRYEFRIYGKYSCMAFHIFEKIQHSVSLRITVY-LGILFSYYAVISLIMLNCDRDMYELSY 708
            :......|:...||..       .::... |.:..:| :|::|  |.::.      ..|.|.|  
 Worm   659 FPPEHIREYDDSGKQP-------PRVVRG-SPKGDIYCVGMIF--YMMVE------REDPYHL-- 705

  Fly   709 IESKIYHYEMDRDTCFHPWVFTNMISLILGISYTFARIPFGLK---IVISCCE-----------T 759
                |:..|....|         :|..||..:: ..||....:   :::..|:           |
 Worm   706 ----IHSVERPNAT---------LIKQILNENH-MPRITDDYRQENMLLEMCKECWDRNPDKRPT 756

  Fly   760 LAYLLIVFFQFAFIFQHSATTTPFMKAELAHCLRVCMMLLTMYAKERQSEFNTKMNYKLNVDLQN 824
            :..|:          :..:|..|..|..|     |..|:       |.||     .|...::...
 Worm   757 IKKLI----------ESISTVYPLSKGNL-----VDQMI-------RMSE-----KYADELEQMV 794

  Fly   825 KQKAADLTNQSI--IILLNNILPSHVVDLYLNSLAKHELYYENYRMVSVMFAMLINF----PMNL 883
            ..:.|||.:..:  :.|||.:||:.:.....|.|......||:   .:|||..:.:|    ..:.
 Worm   795 AIRTADLADAQMQTMRLLNEMLPASIAKDLKNGLIMPPRSYES---ATVMFVQICDFNALMKRSS 856

  Fly   884 PS--LRVLNDIITQFDRLLTAYREYYVVEKIKVVGCTYMAACGLD--------FNLAS---NIRQ 935
            |.  :..||||..|||.::..:..|    |::..|.|||.|.|:.        |.:|.   .||:
 Worm   857 PEQVIAFLNDIYDQFDTVIKRHDAY----KVETTGETYMVASGVPHENEGRHIFEVAEISLEIRE 917

  Fly   936 TDHFRNSSLHVEVEHARNHRMTDENYDSDMNNDEVVFIMTTFALDLMRTLAACNRAYSSSFFERS 1000
            .     |.::| ::|.:|:::                                            
 Worm   918 I-----SYIYV-LQHDKNYKL-------------------------------------------- 932

  Fly  1001 LSQGKICIGISSGEIMAGVVGASQPHYDIWGNPVNMASRMESTGLPGHIQVTEESAKIL-QEFDI 1064
                :|.||..:|.|.|||:|...|.|.::|:.||.||||:|...|..||.:|.:|::| ...:.
 Worm   933 ----RIRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARLLFDSHEY 993

  Fly  1065 KCIYRGMTFVKGRGDIPTYFVGIDENL 1091
            |.:.||:..|||:|::..|:  ::|:|
 Worm   994 KFVKRGIVHVKGKGEVNCYW--LNEHL 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXCNP_609593.1 Nucleotidyl_cyc_III 307..466 CDD:448371 29/179 (16%)
Nucleotidyl_cyc_III 861..1085 CDD:448371 63/241 (26%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960 33/168 (20%)
PK_GC 495..768 CDD:270894 60/368 (16%)
CYCc 803..996 CDD:214485 63/253 (25%)

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