DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACXC and odr-1

DIOPT Version :9

Sequence 1:NP_609593.1 Gene:ACXC / 34689 FlyBaseID:FBgn0040508 Length:1130 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:1002 Identity:197/1002 - (19%)
Similarity:358/1002 - (35%) Gaps:326/1002 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 YDVISTDILHNLGF-NMMGIFF-----------RIMNDTMVRASFLDRHQFIMEETWLRHALLQE 262
            ||:.|.  .:|:|. ::.|..|           .|:|...|:......:.||:..       |||
 Worm   223 YDIYSA--FYNIGIRSLSGFRFIIVVILNKPPDEILNQPNVKNLLYGSNAFIISP-------LQE 278

  Fly   263 ------SILLDSILPPQIAKPVQEKIKS--------------KITQSENSPDRF---QMGPRTTE 304
                  ||:.|.|  |.:|   .::..:              .:..:|...|.:   ..|...|.
 Worm   279 QYSDAFSIMQDVI--PNLA---DDQFTTFLRIYHACYAYCVGSVNGAETQTDNYHTAMSGKAVTT 338

  Fly   305 SFMAIQIHPDVSIL--YA-DVVNYTHLT--TTLTVGNLVKVLHDLYGRFDIAASNFKVQRIKFLG 364
            .:.........|:|  || ..:|...:|  :.||:.::.|.. |.|..|.::.:.        ..
 Worm   339 KYGTFTFDNSGSVLTNYAVFTINPAEMTFESILTLKSVAKSC-DTYNCFQLSPNK--------TS 394

  Fly   365 DCYYCVAGLTTPDPDHAK-CCVS--------------LGISMISNIQEVRAERGL-DIDMRIGVH 413
            |..:.:..:..||...|| .||:              :.|:::..:::.|.:..: .:..::...
 Worm   395 DLLWTLKDMDPPDDCVAKSSCVNYIPHIIAAVVIVTIIVIAIVIIVKQRRHKLNIYKLTWKVPKE 459

  Fly   414 SGSLLAGIIGEAKLQFDIWGTDVEIANHLESTGEPGYVHVSGRTLSMLNPADYTILSGTQKAQSD 478
            |..::.....:||:|       .|:.|...:|.....:....|..     ..|.:: |||:|:  
 Worm   460 SLKIIVNKNADAKMQ-------RELENRASNTDNAAALTSRRRVF-----GSYALV-GTQRAE-- 509

  Fly   479 PVLQYIHTYLLTGQVARESFITSIGGVRSSSVLEVKSIDRIRSSRPSQSSMTDEFREEFRNMPVG 543
                    |:...|:.:.:|..:             ::|.:.|.:..|.....:|.         
 Worm   510 --------YVQFKQIRKINFPET-------------TLDYLYSLKQLQHDNLAKFY--------- 544

  Fly   544 GINLNSPCCRRTRLDT--HKKT------QREIGI---FCAAF-KDSSLEWNYLHQPDFIFKSSML 596
            ||.:|......|.|.|  .:.|      .|:.|:   |.:|| :|......|||:....:...:.
 Worm   545 GIQVNDDIMTMTILHTLVERGTLEEFCLDRDFGMDDTFKSAFMRDILKGLQYLHKSSIGYHGHLQ 609

  Fly   597 LAWGIGCCLIYIQIVTNNFSCTACIVVDLVTFFFLTSLL-----------------CLAWYKNVC 644
            .:    .|||.|..|..            :|.:.:::.:                 .:.:.:.||
 Worm   610 AS----TCLIDINWVLK------------LTLYGVSNFMSDQLDAENIKVPEQAAHMITYPQYVC 658

  Fly   645 WWKSGRYEFRIYGKYSCMAFHIFEKIQHSVSLRITVY-LGILFSYYAVISLIMLNCDRDMYELSY 708
            :......|:...||..       .::... |.:..:| :|::|  |.::.      ..|.|.|  
 Worm   659 FPPEHIREYDDSGKQP-------PRVVRG-SPKGDIYCVGMIF--YMMVE------REDPYHL-- 705

  Fly   709 IESKIYHYEMDRDTCFHPWVFTNMISLILGISYTFARIPFGLK---IVISCCE-----------T 759
                |:..|....|         :|..||..:: ..||....:   :::..|:           |
 Worm   706 ----IHSVERPNAT---------LIKQILNENH-MPRITDDYRQENMLLEMCKECWDRNPDKRPT 756

  Fly   760 LAYLLIVFFQFAFIFQHSATTTPFMKAELAHCLRVCMMLLTMYAKERQSEFNTKMNYKLNVDLQN 824
            :..|:          :..:|..|..|..|     |..|:       |.||     .|...::...
 Worm   757 IKKLI----------ESISTVYPLSKGNL-----VDQMI-------RMSE-----KYADELEQMV 794

  Fly   825 KQKAADLTNQSI--IILLNNILPSHVVDLYLNSLAKHELYYENYRMVSVMFAMLINF----PMNL 883
            ..:.|||.:..:  :.|||.:||:.:.....|.|......||:   .:|||..:.:|    ..:.
 Worm   795 AIRTADLADAQMQTMRLLNEMLPASIAKDLKNGLIMPPRSYES---ATVMFVQICDFNALMKRSS 856

  Fly   884 PS--LRVLNDIITQFDRLLTAYREYYVVEKIKVVGCTYMAACGLD--------FNLAS---NIRQ 935
            |.  :..||||..|||.::..:..|    |::..|.|||.|.|:.        |.:|.   .||:
 Worm   857 PEQVIAFLNDIYDQFDTVIKRHDAY----KVETTGETYMVASGVPHENEGRHIFEVAEISLEIRE 917

  Fly   936 TDHFRNSSLHVEVEHARNHRMTDENYDSDMNNDEVVFIMTTFALDLMRTLAACNRAYSSSFFERS 1000
            .     |.::| ::|.:|:::                                            
 Worm   918 I-----SYIYV-LQHDKNYKL-------------------------------------------- 932

  Fly  1001 LSQGKICIGISSGEIMAGVVGASQPHYDIWGNPVNMASRMESTGLPGHIQVTEESAKIL-QEFDI 1064
                :|.||..:|.|.|||:|...|.|.::|:.||.||||:|...|..||.:|.:|::| ...:.
 Worm   933 ----RIRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARLLFDSHEY 993

  Fly  1065 KCIYRGMTFVKGRGDIPTYFVGIDENL 1091
            |.:.||:..|||:|::..|:  ::|:|
 Worm   994 KFVKRGIVHVKGKGEVNCYW--LNEHL 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXCNP_609593.1 AC_N <33..285 CDD:292831 21/106 (20%)
CYCc 293..468 CDD:214485 33/198 (17%)
Nucleotidyl_cyc_III 307..466 CDD:299850 29/179 (16%)
CYCc 833..1060 CDD:214485 62/246 (25%)
Nucleotidyl_cyc_III 861..1085 CDD:299850 63/241 (26%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:385651 33/168 (20%)
PK_GC 495..768 CDD:270894 60/368 (16%)
CYCc 803..996 CDD:214485 63/253 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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