DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek1 and Lrrc4

DIOPT Version :10

Sequence 1:NP_523559.3 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001032413.1 Gene:Lrrc4 / 641521 RGDID:1560026 Length:652 Species:Rattus norvegicus


Alignment Length:699 Identity:153/699 - (21%)
Similarity:247/699 - (35%) Gaps:202/699 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 CQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANLLNLQKLYL 154
            |.:||:|..:..|  |.|..|.|.::|:.|..||:.|::..|.:|.:..:.|  .:|.:|:.|.|
  Rat    45 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTF--RHLHHLEVLQL 105

  Fly   155 RNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTP 219
            ....|.:||...|.||.:|..|:|..|.|..:||.|..::..||||.|.:|.|..|.|.||...|
  Rat   106 GRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVP 170

  Fly   220 SLHKLDLSHC-DIQTISAQAFGG----------------------LQGLTLLRLNGNKLSELLPK 261
            ||.:|||... .::.||..||.|                      |.||..|.::||...|:.|.
  Rat   171 SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPG 235

  Fly   262 TIETLSRL------------------------------HG------------------IELHDNP 278
            :...||.|                              |.                  :.||.||
  Rat   236 SFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 300

  Fly   279 WLCDCRLRDTKLWL---MKRNIPYPVAPVCSG---GPERIIDRSFADLHVDEFAC-------RPE 330
            |.|||.:    |||   ::..|  |....|.|   .|..:..|...::....|.|       .|.
  Rat   301 WNCDCDI----LWLAWWLREYI--PTNSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPR 359

  Fly   331 MLPISHYVEAAMGENASITCRARAVPAANINWYWNGRLLANNSAFTAYQRIHMLEQVEGGFEKRS 395
            .|.||   |..|.|     .:.|..|.:::.|     ||.|.:..:...|...:..:..|....|
  Rat   360 DLNIS---EDRMAE-----LKCRTPPMSSVKW-----LLPNGTVLSHASRHPRISVLNDGTLNFS 411

  Fly   396 KLVLTNAQETDSSEFYCVAENRAGMAEANFTLHVSMRAAGMASLGSGQIVGLSAALVA------- 453
            :::|     .|:..:.|:..|.||.:.|:..|:||.......:......|.:....::       
  Rat   412 RVLL-----IDTGVYTCMVTNVAGNSNASAYLNVSSAELNTPNFSFFTTVTVETTEISPEDITRK 471

  Fly   454 ---LIVFALG---------VIMCLLLRVKRQ-PYVDSKTPNHMEVITSVNHQNSITNKTQPATGN 505
               :...:.|         .::....||.:| |...:.|.:.|:  ||::.....|.        
  Rat   472 YKPVPTTSTGYQPAYTTSTTVLIQTTRVPKQVPVPSTDTTDKMQ--TSLDEVMKTTK-------- 526

  Fly   506 GSIGGVVIANGAVANIIDGGVVQGGTLERKSSGRGGVPHGVHDQRSANPVQKPPRLTDLPYSTQG 570
                 ::|.......::...::......||.          |.|||.....:...:..:      
  Rat   527 -----IIIGCFVAVTLLAAAMLIVFYKLRKR----------HQQRSTVTAARTVEIIQV------ 570

  Fly   571 YDNNGSVLSTASCFISPSGSTGNGGNNPDLINDTKRFGSDEFADLKIPPISGVGVGGSGEYSRAN 635
             |.:....::|:...:|||.:|.|......|:|...:.:                     |..|:
  Rat   571 -DEDIPAAASAAATAAPSGVSGEGAVVLPTIHDHINYNT---------------------YKPAH 613

  Fly   636 GCDSLYPSGLWEHGA------PVGTTSADDLFMKRYT-DKTPIIDSTQL 677
            |..       |...:      |..||.::...::.:| ||   :..||:
  Rat   614 GAH-------WTENSLGNSLHPTVTTISEPYIIQTHTKDK---VQETQI 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_523559.3 leucine-rich repeat 103..122 CDD:275380 6/18 (33%)
LRR <122..>277 CDD:443914 60/225 (27%)
leucine-rich repeat 123..148 CDD:275380 6/24 (25%)
leucine-rich repeat 149..172 CDD:275380 9/22 (41%)
leucine-rich repeat 173..196 CDD:275380 8/22 (36%)
leucine-rich repeat 197..220 CDD:275380 11/22 (50%)
leucine-rich repeat 221..244 CDD:275380 10/45 (22%)
leucine-rich repeat 245..268 CDD:275380 7/22 (32%)
LRRCT 277..327 CDD:214507 16/55 (29%)
IG_like 338..429 CDD:214653 20/90 (22%)
Ig strand B 346..350 CDD:409353 0/3 (0%)
Ig strand C 359..363 CDD:409353 0/3 (0%)
Ig strand E 395..399 CDD:409353 1/3 (33%)
Ig strand F 409..414 CDD:409353 1/4 (25%)
Ig strand G 422..425 CDD:409353 1/2 (50%)
Lrrc4NP_001032413.1 LRRNT 45..78 CDD:214470 13/34 (38%)
LRR <74..322 CDD:443914 71/255 (28%)
LRR 1 75..96 6/22 (27%)
leucine-rich repeat 76..99 CDD:275380 6/24 (25%)
LRR 2 99..120 7/20 (35%)
leucine-rich repeat 100..123 CDD:275380 9/22 (41%)
LRR 3 123..144 8/20 (40%)
leucine-rich repeat 124..147 CDD:275380 8/22 (36%)
LRR 4 147..168 11/20 (55%)
leucine-rich repeat 148..171 CDD:275380 11/22 (50%)
LRR 5 171..193 9/21 (43%)
leucine-rich repeat 172..196 CDD:275380 9/23 (39%)
LRR 6 196..217 0/20 (0%)
leucine-rich repeat 197..218 CDD:275380 1/20 (5%)
LRR 7 218..239 7/20 (35%)
leucine-rich repeat 219..242 CDD:275380 7/22 (32%)
LRR 8 242..263 1/20 (5%)
leucine-rich repeat 243..266 CDD:275380 1/22 (5%)
LRR 9 266..287 1/20 (5%)
leucine-rich repeat 267..288 CDD:275380 1/20 (5%)
LRRCT 299..350 CDD:214507 16/56 (29%)
IG_like 358..440 CDD:214653 24/99 (24%)
Ig strand B 369..373 CDD:409353 1/8 (13%)
Ig strand C 380..384 CDD:409353 1/8 (13%)
Ig strand E 406..410 CDD:409353 1/3 (33%)
Ig strand F 420..425 CDD:409353 1/4 (25%)
Ig strand G 433..436 CDD:409353 1/2 (50%)

Return to query results.
Submit another query.