DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and LGR6

DIOPT Version :10

Sequence 1:NP_523559.3 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001017403.1 Gene:LGR6 / 59352 HGNCID:19719 Length:967 Species:Homo sapiens


Alignment Length:243 Identity:73/243 - (30%)
Similarity:104/243 - (42%) Gaps:51/243 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PAQQQSTCQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLD-------------------- 127
            |....:.|...|.|:..|...:.:|.:..|..:|..:||.|..||                    
Human    28 PGPGPTACPAPCHCQEDGIMLSADCSELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRFL 92

  Fly   128 ----MSGNKLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERE----------------------- 165
                :|||.|..:..:.|  :.|.:|:.|.|:|.::|.|..|                       
Human    93 EELRLSGNHLSHIPGQAF--SGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPE 155

  Fly   166 -TFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHC 229
             :|:||::|..|.|..|.|..:|..||.::|:|:.:|||.|.|..|...||.|..||..|.|.:.
Human   156 RSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNN 220

  Fly   230 DIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSRLHGIELHDN 277
            .||.:...:|.||..|..|.||.|||.| .|..|.||.||..:..|:|
Human   221 RIQHLGTHSFEGLHNLETLDLNYNKLQE-FPVAIRTLGRLQELGFHNN 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_523559.3 leucine-rich repeat 103..122 CDD:275380 4/18 (22%)
LRR <122..>277 CDD:443914 62/202 (31%)
leucine-rich repeat 123..148 CDD:275380 9/48 (19%)
leucine-rich repeat 149..172 CDD:275380 10/46 (22%)
leucine-rich repeat 173..196 CDD:275380 8/22 (36%)
leucine-rich repeat 197..220 CDD:275380 10/22 (45%)
leucine-rich repeat 221..244 CDD:275380 8/22 (36%)
leucine-rich repeat 245..268 CDD:275380 12/22 (55%)
LRRCT 277..327 CDD:214507 1/1 (100%)
IG_like 338..429 CDD:214653
Ig strand B 346..350 CDD:409353
Ig strand C 359..363 CDD:409353
Ig strand E 395..399 CDD:409353
Ig strand F 409..414 CDD:409353
Ig strand G 422..425 CDD:409353
LGR6NP_001017403.1 LRRNT 34..68 CDD:214470 9/33 (27%)
LRR <70..>293 CDD:443914 62/201 (31%)
leucine-rich repeat 70..91 CDD:275380 2/20 (10%)
LRR 1 91..112 5/22 (23%)
leucine-rich repeat 92..115 CDD:275380 6/24 (25%)
LRR 2 115..136 7/20 (35%)
leucine-rich repeat 116..139 CDD:275380 7/22 (32%)
LRR 3 139..160 1/20 (5%)
leucine-rich repeat 140..163 CDD:275380 3/22 (14%)
LRR 4 163..186 8/22 (36%)
leucine-rich repeat 164..187 CDD:275380 8/22 (36%)
LRR 5 187..208 9/20 (45%)
leucine-rich repeat 188..211 CDD:275380 10/22 (45%)
LRR 6 211..232 7/20 (35%)
leucine-rich repeat 212..235 CDD:275380 8/22 (36%)
LRR 7 235..256 10/21 (48%)
leucine-rich repeat 236..258 CDD:275380 12/22 (55%)
LRR 8 258..279 4/10 (40%)
leucine-rich repeat 259..282 CDD:275380 3/9 (33%)
LRR_8 281..364 CDD:404697
LRR 9 282..303
leucine-rich repeat 283..304 CDD:275380
LRR 10 306..328
LRR 11 329..350
leucine-rich repeat 330..344 CDD:275378
LRR <349..>473 CDD:443914
LRR 12 353..374
leucine-rich repeat 354..399 CDD:275380
LRR 13 375..396
leucine-rich repeat 376..390 CDD:275378
LRR 14 399..420
leucine-rich repeat 400..423 CDD:275380
LRR 15 423..443
leucine-rich repeat 424..444 CDD:275380
7tmA_LGR6 562..834 CDD:320484
TM helix 1 563..589 CDD:320484
TM helix 2 597..622 CDD:320484
TM helix 3 642..672 CDD:320484
TM helix 4 684..706 CDD:320484
TM helix 5 728..757 CDD:320484
TM helix 6 766..796 CDD:320484
TM helix 7 806..831 CDD:320484
Blue background indicates that the domain is not in the aligned region.

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