DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and Slitrk3

DIOPT Version :9

Sequence 1:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001344780.1 Gene:Slitrk3 / 386750 MGIID:2679447 Length:980 Species:Mus musculus


Alignment Length:817 Identity:184/817 - (22%)
Similarity:268/817 - (32%) Gaps:265/817 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SSSGPGGYRPAPSSQ-NEVYSIADSQPMTEDGYMP-----PSQHFPPTHSDL------DPPAQQQ 87
            |||....:...|||. :.|:..|.|.........|     |....||:.|..      .||....
Mouse   300 SSSKENAWPTKPSSMLSSVHFTASSVEYKSSNKQPKPTKQPRTPRPPSTSQALYPGPNQPPIAPY 364

  Fly    88 ST-------CQTVCACKWKGGK--QTVECIDRHLIQIPEHIDP--NTQVLDMSGNKLQTLSNEQF 141
            .|       |.|.|.|......  .||.|.:|....|.|.:..  |.:.|.:|.|.:|.:....|
Mouse   365 QTRPPIPIICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDF 429

  Fly   142 IRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHN-LLVTVPSLALGHIPSLRELTLASN 205
              .|..:|..|:|.|.:|..::...|..|.||..|.|:.| :....|.:..| :.||..|....|
Mouse   430 --WNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRG-LQSLHYLYFEFN 491

  Fly   206 HIHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSEL-LP--KTIETLS 267
            .|.:|:..||...|:|..|.|::..::|:...||.   |.:|.|||..|...| ||  ..:|.|:
Mouse   492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFA---GTSLARLNLRKNYFLYLPVAGVLEHLN 553

  Fly   268 RLHGIELHDNPWLCDCRLRDTKLWLMKRNIPYPVAPVCSGGPERIIDRSFADLHVDEFACRPEML 332
            .:..|:|::|||.|.|.|...|.|:...:....|..|....||.:..|....:.: |..| ||||
Mouse   554 AIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLTHRDVRTIEL-EVLC-PEML 616

  Fly   333 PISHYVEAAMGENASITCRARAVPAANINWYWNGRLLANNSAFTAYQRIHMLEQVEGGFEKRSKL 397
            .|     |..|.:          |....:::.||    ..::.:.|:     ....||....|.|
Mouse   617 HI-----AQPGPS----------PPQPGDYHPNG----GPTSASPYE-----FSPPGGPVPLSVL 657

  Fly   398 VLTNAQETDSSEFYCVAENRAGMAEANFTLHVSMRAAGMASLGSGQIVGLSAALVALIVFALGVI 462
            :|                                         |..::..||..||..:||. |:
Mouse   658 IL-----------------------------------------SLLVLFFSAVFVAAGLFAY-VL 680

  Fly   463 ----MCLLLRVKRQPYVDSKTPNHMEVITSVNHQNSITNKTQPATGNGSIGGVVIANGAVANIID 523
                ..|..|.|||..||         :|.:..|   .::....:| |:.||            .
Mouse   681 RRRRKKLPFRSKRQEGVD---------LTGIQMQ---CHRLFEDSG-GNSGG------------S 720

  Fly   524 GGVVQGG--TLE--RKSSGRGGV----PHGVHDQRSANPVQKPPRLTDLPYSTQGYDNNGSVLST 580
            ||   ||  ||.  .|:...|.|    ||.| .|...||:.||....::                
Mouse   721 GG---GGRPTLSSPEKAPPVGHVYEYIPHPV-TQMCNNPIYKPREEEEV---------------- 765

  Fly   581 ASCFISPSGSTGNG--GNNPDLINDTKRFGSDEFADLKIPPISGVGVGGSGEYSRANGCDSLYPS 643
            |:.....:|:|..|  |..|..:.:. ..||::||:                             
Mouse   766 AASAAQDTGATDRGGPGTQPTGMAEV-LLGSEQFAE----------------------------- 800

  Fly   644 GLWEHGAPVGTTSADDLFMKRYTDKTPIIDSTQLYDLHERTAATDYFSKTFPRSHLQQGMMTGGG 708
                  .|....|.....:::..:....:.::||     .|..|.......|. |...|.::|.|
Mouse   801 ------TPKENHSNYRTLLEKEKEWALAVSNSQL-----NTIVTVNHHHPHPH-HSAVGGVSGVG 853

  Fly   709 GGTSTASTVTTNLSGGSSSGYPNDYGLPLVPGAEHQHNHQLQMHPLQQLQQQLTSTLNHQKQEGS 773
            |||           ||..:|:           ..|:.|..:.:.|                    
Mouse   854 GGT-----------GGDLAGF-----------RHHEKNGGVVLFP-------------------- 876

  Fly   774 STGSSPHFSSRTLPRLHEGSGGGGSS----RSSPTPA 806
                             .|.|.||.|    |..|.||
Mouse   877 -----------------PGGGCGGGSLLLDRERPQPA 896

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380 6/20 (30%)
LRR_RI <119..277 CDD:238064 49/163 (30%)
leucine-rich repeat 123..148 CDD:275380 6/24 (25%)
LRR_8 148..207 CDD:290566 18/59 (31%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 6/23 (26%)
LRR_8 195..255 CDD:290566 20/59 (34%)
leucine-rich repeat 197..220 CDD:275380 7/22 (32%)
leucine-rich repeat 221..244 CDD:275380 6/22 (27%)
leucine-rich repeat 245..268 CDD:275380 10/25 (40%)
LRRCT 277..327 CDD:214507 14/49 (29%)
IG_like 338..429 CDD:214653 11/90 (12%)
Ig 346..426 CDD:143165 9/79 (11%)
Slitrk3NP_001344780.1 LRR 1 79..100
leucine-rich repeat 82..103 CDD:275380
LRR 2 103..124
leucine-rich repeat 104..127 CDD:275380
LRR_8 106..162 CDD:338972
LRR 3 127..148
leucine-rich repeat 128..151 CDD:275380
LRR_8 151..209 CDD:338972
LRR 4 151..172
leucine-rich repeat 152..175 CDD:275380
LRR 5 175..196
leucine-rich repeat 176..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..403 CDD:275380 26/102 (25%)