DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and Lrg1

DIOPT Version :10

Sequence 1:NP_523559.3 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_038939952.1 Gene:Lrg1 / 367455 RGDID:1359464 Length:342 Species:Rattus norvegicus


Alignment Length:230 Identity:65/230 - (28%)
Similarity:100/230 - (43%) Gaps:32/230 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 PNTQVLDMSGNKLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVT 185
            |..:|||::.|.|::|....|..:..||  .|.||..::.|......:||..|..|||:.|.|.:
  Rat   109 PRLRVLDLTRNALRSLPPGLFRSSAALN--TLVLRENQLQEASARWLQGLDALGYLDLAENRLRS 171

  Fly   186 VP-----------SLALGH-----IPS--------LRELTLASNHIHKIESQAFGNTPSLHKLDL 226
            :|           :|.|||     :|.        |:.|.|..|.:.::|:......|.|..|.|
  Rat   172 LPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPFLGVLFL 236

  Fly   227 SHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSR-----LHGIELHDNPWLCDCRLR 286
            :...:..::|.:|.||:.|.:|.|:.|.||...|.....|.|     ..|.::..|||:||..|.
  Rat   237 NDNQLTAVAADSFRGLKQLDMLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDVSHNPWVCDKDLV 301

  Fly   287 DTKLWL-MKRNIPYPVAPVCSGGPERIIDRSFADL 320
            |...|| ..|:..:........|||.:..:...|:
  Rat   302 DLCRWLAANRHKMFSQNDTLCAGPEAVRGQRLLDV 336

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity