DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek1 and Lrrn4

DIOPT Version :9

Sequence 1:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_230550.4 Gene:Lrrn4 / 311443 RGDID:1305256 Length:735 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380
LRR_RI <119..277 CDD:238064
leucine-rich repeat 123..148 CDD:275380
LRR_8 148..207 CDD:290566
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
LRR_8 195..255 CDD:290566
leucine-rich repeat 197..220 CDD:275380
leucine-rich repeat 221..244 CDD:275380
leucine-rich repeat 245..268 CDD:275380
LRRCT 277..327 CDD:214507
IG_like 338..429 CDD:214653
Ig 346..426 CDD:143165
Lrrn4XP_230550.4 leucine-rich repeat 64..83 CDD:275380
LRR_8 82..141 CDD:290566
leucine-rich repeat 84..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 155..178 CDD:275380
LRR_RI <163..>296 CDD:238064
LRR_8 177..238 CDD:290566
leucine-rich repeat 179..207 CDD:275380
LRR_8 208..292 CDD:290566
leucine-rich repeat 208..231 CDD:275380
leucine-rich repeat 232..256 CDD:275380
leucine-rich repeat 257..281 CDD:275380
leucine-rich repeat 305..317 CDD:275378
FN3 580..661 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.