DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and Lrrc4c

DIOPT Version :10

Sequence 1:NP_523559.3 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001101223.1 Gene:Lrrc4c / 311236 RGDID:1311013 Length:640 Species:Rattus norvegicus


Alignment Length:504 Identity:129/504 - (25%)
Similarity:198/504 - (39%) Gaps:111/504 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 TCQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANLLNLQKLY 153
            ||.:||:|..:..|  |.|:.::|.::|:.|..||::|::..|::|.:....|  .:|.:|:.|.
  Rat    46 TCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSF--KHLRHLEILQ 106

  Fly   154 LRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNT 218
            |....|..||...|.||.||..|:|..|.|.|:|:.|..::..|:||.|.:|.|..|.|.||...
  Rat   107 LSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRI 171

  Fly   219 PSLHKLDLSH-------------------------CD---------------------------- 230
            |||.:|||..                         |:                            
  Rat   172 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRP 236

  Fly   231 ------------------IQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIET-LSRLHGIELHD 276
                              ||.|...||..||.|..:.|..|.|: |||..:.| |..|..|.||.
  Rat   237 GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHH 300

  Fly   277 NPWLCDCRLRDTKLWLMKRNIPYPVAPVCS--GGPERIIDRSFADLHVDEFAC-RPEMLPISHYV 338
            |||.|:|.:.....|:  |::.......|:  ..|..:..|...:|..:.|.| .|.::.....:
  Rat   301 NPWNCNCDILWLSWWI--RDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363

  Fly   339 EAAMGENASITCRARAVPAANINWYW-NGRLLANNSAFTAYQ-RIHMLEQVEGGFEKRSKLVLTN 401
            ....|..|.:.||| :....:::|.. ||.::.:.    ||: ||.:|..        ..|..||
  Rat   364 NVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHG----AYKVRIAVLSD--------GTLNFTN 415

  Fly   402 AQETDSSEFYCVAENRAGMAEANFTLHVSMRAAGMASLGSGQIVGLSAALVALIVFALGVIMCLL 466
            ....|:..:.|:..|..|...|:.||:|:.......|.       .|...|..:..:........
  Rat   416 VTVQDTGMYTCMVSNSVGNTTASATLNVTAATTTPFSY-------FSTVTVETMEPSQDEARTTD 473

  Fly   467 LRVKRQPYVDSKTPNHMEVITSVNHQNSITNK---TQPATG-NGSIGGV 511
            ..|...|.:|.:|.|   |.||:..|::.:.:   |.|.|. |..|.|:
  Rat   474 NNVGPTPVIDWETTN---VTTSLTPQSTRSTEKTFTIPVTDINSGIPGI 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_523559.3 leucine-rich repeat 103..122 CDD:275380 5/18 (28%)
LRR <122..>277 CDD:443914 62/226 (27%)
leucine-rich repeat 123..148 CDD:275380 6/24 (25%)
leucine-rich repeat 149..172 CDD:275380 9/22 (41%)
leucine-rich repeat 173..196 CDD:275380 8/22 (36%)
leucine-rich repeat 197..220 CDD:275380 10/22 (45%)
leucine-rich repeat 221..244 CDD:275380 11/93 (12%)
leucine-rich repeat 245..268 CDD:275380 9/23 (39%)
LRRCT 277..327 CDD:214507 12/51 (24%)
IG_like 338..429 CDD:214653 23/92 (25%)
Ig strand B 346..350 CDD:409353 1/3 (33%)
Ig strand C 359..363 CDD:409353 0/3 (0%)
Ig strand E 395..399 CDD:409353 1/3 (33%)
Ig strand F 409..414 CDD:409353 1/4 (25%)
Ig strand G 422..425 CDD:409353 1/2 (50%)
Lrrc4cNP_001101223.1 LRRNT 47..80 CDD:214470 12/34 (35%)
LRR <76..325 CDD:443914 69/253 (27%)
leucine-rich repeat 78..101 CDD:275380 6/24 (25%)
leucine-rich repeat 102..125 CDD:275380 9/22 (41%)
leucine-rich repeat 126..149 CDD:275380 8/22 (36%)
leucine-rich repeat 150..173 CDD:275380 10/22 (45%)
leucine-rich repeat 174..198 CDD:275380 4/23 (17%)
leucine-rich repeat 199..220 CDD:275380 1/20 (5%)
leucine-rich repeat 221..244 CDD:275380 0/22 (0%)
leucine-rich repeat 245..268 CDD:275380 6/22 (27%)
leucine-rich repeat 269..290 CDD:275380 8/21 (38%)
IG_like 360..443 CDD:214653 23/95 (24%)
Ig strand B 371..375 CDD:409390 1/3 (33%)
Ig strand C 383..387 CDD:409390 0/3 (0%)
Ig strand E 409..413 CDD:409390 1/3 (33%)
Ig strand F 423..428 CDD:409390 1/4 (25%)
Ig strand G 436..439 CDD:409390 1/2 (50%)

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