DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and Lrrc55

DIOPT Version :9

Sequence 1:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001381943.1 Gene:Lrrc55 / 311171 RGDID:1561726 Length:311 Species:Rattus norvegicus


Alignment Length:268 Identity:68/268 - (25%)
Similarity:103/268 - (38%) Gaps:78/268 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 HSDLDPPAQQQSTCQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQF 141
            |||..      ::|..:|.|:    .|.|:|.::.|..:|..:..:|:.|.::.|::..:.....
  Rat    44 HSDAG------ASCPVLCTCR----NQVVDCSNQRLFSVPPDLPMDTRNLSLAHNRIAAVPPGYL 98

  Fly   142 IRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPS-----------LALGHIP 195
              ...:.|:.|.|||..:.|:....|.....|..||||:|.|..||:           :.|.|.|
  Rat    99 --TCYMELRVLDLRNNSLMELPPGLFLHAKRLAHLDLSYNNLSHVPADMFREAHGLVHIDLSHNP 161

  Fly   196 SLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLP 260
            .||          ::..|||.....|..||||:..:..:|.:|..||.||..|::.|        
  Rat   162 WLR----------RVHPQAFQGLVHLRDLDLSYGGLAFLSLEALEGLPGLVTLQIGG-------- 208

  Fly   261 KTIETLSRLHGIELHDNPWLCDCRLRDTKLWLMKRNIPYPVAPVCSGGPERIIDRSFADLHVDEF 325
                            |||:|.|.:.....||..|                 |.|..||..:.| 
  Rat   209 ----------------NPWVCGCTMEPLLKWLRNR-----------------IQRCTADSQLAE- 239

  Fly   326 ACR--PEM 331
             ||  ||:
  Rat   240 -CRGPPEV 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380 5/18 (28%)
LRR_RI <119..277 CDD:238064 40/168 (24%)
leucine-rich repeat 123..148 CDD:275380 3/24 (13%)
LRR_8 148..207 CDD:290566 21/69 (30%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 11/33 (33%)
LRR_8 195..255 CDD:290566 19/59 (32%)
leucine-rich repeat 197..220 CDD:275380 5/22 (23%)
leucine-rich repeat 221..244 CDD:275380 9/22 (41%)
leucine-rich repeat 245..268 CDD:275380 3/22 (14%)
LRRCT 277..327 CDD:214507 13/49 (27%)
IG_like 338..429 CDD:214653
Ig 346..426 CDD:143165
Lrrc55NP_001381943.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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