DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and Rtn4rl2

DIOPT Version :9

Sequence 1:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_852045.1 Gene:Rtn4rl2 / 311169 RGDID:727797 Length:420 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380
LRR_RI <119..277 CDD:238064
leucine-rich repeat 123..148 CDD:275380
LRR_8 148..207 CDD:290566
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
LRR_8 195..255 CDD:290566
leucine-rich repeat 197..220 CDD:275380
leucine-rich repeat 221..244 CDD:275380
leucine-rich repeat 245..268 CDD:275380
LRRCT 277..327 CDD:214507
IG_like 338..429 CDD:214653
Ig 346..426 CDD:143165
Rtn4rl2NP_852045.1 LRR_8 60..117 CDD:290566
LRR 1 61..82
leucine-rich repeat 62..83 CDD:275380
LRR 2 83..104
leucine-rich repeat 84..107 CDD:275380
LRR_RI 103..>261 CDD:238064
LRR 3 107..129
LRR_8 108..167 CDD:290566
leucine-rich repeat 108..132 CDD:275380
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275380
LRR_8 156..215 CDD:290566
LRR 5 156..177
leucine-rich repeat 157..180 CDD:275380
LRR 6 180..201
leucine-rich repeat 181..204 CDD:275380
LRR_8 204..262 CDD:290566
LRR 7 204..225
leucine-rich repeat 205..228 CDD:275380
LRR 8 228..249
leucine-rich repeat 229..252 CDD:275380
TPKR_C2 261..311 CDD:301599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..390
Important for interaction with MAG. /evidence=ECO:0000269|PubMed:19420245 315..327
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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