DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and Lrit1

DIOPT Version :9

Sequence 1:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_647547.2 Gene:Lrit1 / 246214 RGDID:628607 Length:623 Species:Rattus norvegicus


Alignment Length:395 Identity:108/395 - (27%)
Similarity:163/395 - (41%) Gaps:65/395 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LDPPAQQQSTCQTVCACKW----KGGK-QTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNE 139
            |..|.|..|.|.:.|:|..    .|.| :||.|.|..|...|..|.|:|                
  Rat    13 LGGPHQAWSFCPSQCSCSLHILSDGSKARTVVCSDPDLTLPPASIPPDT---------------- 61

  Fly   140 QFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLAS 204
                      .||.|....|..:..|||:.|:.|.:|.|.:|.|..:.:|.|..:..||||.|..
  Rat    62 ----------CKLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPG 116

  Fly   205 NHIHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSRL 269
            ||:......|..:||.|..|||....:.|:..:|...|:.||.|.|:.|:|..|..:.::|.:.|
  Rat   117 NHLVTFPWAALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDTWAHL 181

  Fly   270 HG------------IELHDNPWLCDCRLRDTKLWL--MKRNIPYPVAPVCSGGPERIIDRSFADL 320
            ..            :.|.||||:|||||.|....|  ...|:.:..|.:..|.|..:...:|:.|
  Rat   182 KTGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAGVAFSQL 246

  Fly   321 HVDEFACR-PEMLPISHYVEAAMGENASITCRARAVPAANINW-YWNGRLLANNSAFTAYQRIHM 383
            .:.:  |: ||:.|....:.:.:|....:.|.|..:|...::| ..|||.|...        :| 
  Rat   247 ELRK--CQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGT--------VH- 300

  Fly   384 LEQVEGGFEKRSKLVLTNAQETDSSEFYCVAENRAGMAEANFTLHVSMRAAGMASLGSGQIVGLS 448
             ::|.......:.|.|......||.::.|.|:|..|.:|...:|.|:....      |.:..|:.
  Rat   301 -QEVSSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVTEPQT------STEYTGIP 358

  Fly   449 AALVA 453
            .||.|
  Rat   359 GALWA 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380 7/18 (39%)
LRR_RI <119..277 CDD:238064 45/169 (27%)
leucine-rich repeat 123..148 CDD:275380 1/24 (4%)
LRR_8 148..207 CDD:290566 21/58 (36%)
leucine-rich repeat 149..172 CDD:275380 8/22 (36%)
leucine-rich repeat 173..196 CDD:275380 7/22 (32%)
LRR_8 195..255 CDD:290566 22/59 (37%)
leucine-rich repeat 197..220 CDD:275380 9/22 (41%)
leucine-rich repeat 221..244 CDD:275380 7/22 (32%)
leucine-rich repeat 245..268 CDD:275380 8/22 (36%)
LRRCT 277..327 CDD:214507 16/51 (31%)
IG_like 338..429 CDD:214653 21/91 (23%)
Ig 346..426 CDD:143165 19/80 (24%)
Lrit1NP_647547.2 LRRNT 23..61 CDD:214470 13/37 (35%)
LRR 1 60..81 8/46 (17%)
LRR_8 63..143 CDD:290566 29/79 (37%)
leucine-rich repeat 64..84 CDD:275378 7/19 (37%)
LRR 2 84..105 7/20 (35%)
leucine-rich repeat 85..132 CDD:275378 16/46 (35%)
LRR 3 108..128 8/19 (42%)
LRR_8 131..>176 CDD:290566 15/44 (34%)
LRR_4 131..172 CDD:289563 15/40 (38%)
LRR 4 132..153 6/20 (30%)
leucine-rich repeat 133..156 CDD:275378 7/22 (32%)
LRR 5 156..177 7/20 (35%)
leucine-rich repeat 157..180 CDD:275378 8/22 (36%)
leucine-rich repeat 181..205 CDD:275378 6/23 (26%)
TPKR_C2 201..>240 CDD:301599 14/38 (37%)
Ig 257..345 CDD:299845 22/97 (23%)
IG_like 267..345 CDD:214653 21/87 (24%)
FN3 431..501 CDD:214495
LRR 6 525..548
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6040
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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