DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek1 and lrit3b

DIOPT Version :9

Sequence 1:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:464 Identity:116/464 - (25%)
Similarity:170/464 - (36%) Gaps:139/464 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QQSTCQTVCACKWKG-----GKQTVECIDRHLIQIPEHID-PNTQVLDMSGNKLQTLSNEQFIR- 143
            |...|.::|.|..:|     |.:||.|.:..|..||  || ||    |....:|:..|..:..| 
Zfish    48 QSPACPSLCTCVLQGRSDTKGLRTVLCKNPALTAIP--IDLPN----DTVKFRLERTSVSRIFRG 106

  Fly   144 --ANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNH 206
              :.:..|..|:|....|..:...:|..|::|.||.|..|||.|.|...|..:|.||.|.|.:|.
Zfish   107 AFSAMPELLYLWLTYNSISVLHPRSFTNLSSLHELRLDGNLLSTFPWEGLRDMPRLRTLGLHNNR 171

  Fly   207 IHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSEL--------LPKTI 263
            :.:|        |.|                |...|:.:|.|.|:.|:||.|        |....
Zfish   172 LARI--------PLL----------------AVRYLRNVTYLDLSSNRLSTLANDLTALWLFSDS 212

  Fly   264 ETLSRLHGIELHDNPWLCDCRLRDTKLWLMKRNIPYPVAPVCSGGPER---IIDRSFA-----DL 320
            ....|...:.|.||||:||||| .|.|.:             |.|||.   ::||...     ||
Zfish   213 NQTQRSFVLGLQDNPWVCDCRL-STLLDI-------------SRGPESSLVLLDRFLTCSEPLDL 263

  Fly   321 ------HVDEFAC-RPEMLPISHYVEAAMGENASITCRARAVPAANINWYWNG-RLLANNSAFTA 377
                  .|:...| ||.::..:..:.|.:|....:.|.|...|...:.|..:. |.|.|......
Zfish   264 AGVPFQSVELSRCRRPYVVTSATKITALLGSTVLLRCEATGHPTPALMWIKSAKRNLYNQGCCKQ 328

  Fly   378 YQRIHMLEQVEGGFEKR---------------SKLVLTNAQETDSSEFYCVAENRAGMAEANFTL 427
            .|.....|:    |.|:               |.:.|.....:|:.|:.|.|:|.||::||..:|
Zfish   329 TQSSLDTER----FPKKLFGYVQESPRVGVRWSVVSLNGISYSDAGEYRCRAQNMAGISEAVVSL 389

  Fly   428 HVSMRAAGMASLGSGQIVGLSAALVALIVFALGVIMCLLLRVKRQPYVDSKTPNHMEVITSVNHQ 492
            :|               ||:.|                       .|.|.|..:..:..|     
Zfish   390 NV---------------VGVMA-----------------------EYTDFKNSDQQQTTT----- 411

  Fly   493 NSITNKTQP 501
            .|.:.:|:|
Zfish   412 KSDSKRTKP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380 8/19 (42%)
LRR_RI <119..277 CDD:238064 45/169 (27%)
leucine-rich repeat 123..148 CDD:275380 4/27 (15%)
LRR_8 148..207 CDD:290566 22/58 (38%)
leucine-rich repeat 149..172 CDD:275380 6/22 (27%)
leucine-rich repeat 173..196 CDD:275380 10/22 (45%)
LRR_8 195..255 CDD:290566 15/59 (25%)
leucine-rich repeat 197..220 CDD:275380 6/22 (27%)
leucine-rich repeat 221..244 CDD:275380 3/22 (14%)
leucine-rich repeat 245..268 CDD:275380 8/30 (27%)
LRRCT 277..327 CDD:214507 19/63 (30%)
IG_like 338..429 CDD:214653 25/106 (24%)
Ig 346..426 CDD:143165 22/95 (23%)
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470 16/46 (35%)
leucine-rich repeat 69..89 CDD:275380 10/25 (40%)
LRR_8 112..172 CDD:290566 22/59 (37%)
leucine-rich repeat 114..137 CDD:275378 6/22 (27%)
leucine-rich repeat 138..161 CDD:275378 10/22 (45%)
LRR_8 160..214 CDD:290566 19/77 (25%)
LRR_4 160..201 CDD:289563 18/64 (28%)
leucine-rich repeat 162..185 CDD:275378 10/46 (22%)
leucine-rich repeat 186..199 CDD:275378 6/12 (50%)
leucine-rich repeat 215..230 CDD:275378 6/14 (43%)
Ig 278..391 CDD:299845 27/116 (23%)
I-set 279..391 CDD:254352 26/115 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D246406at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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