DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15483 and Large2

DIOPT Version :9

Sequence 1:NP_609592.1 Gene:CG15483 / 34687 FlyBaseID:FBgn0032457 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_006234624.1 Gene:Large2 / 311202 RGDID:735214 Length:715 Species:Rattus norvegicus


Alignment Length:432 Identity:101/432 - (23%)
Similarity:155/432 - (35%) Gaps:112/432 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NYVMADHGD----IPCYSNVTYTTH--ADYTYLDNVVPLLERWRSPLSLAIYAPGTDFEPTIHSI 115
            |.|:.:|.:    :||..||..:.|  |:..||:.....:..|.||..|.:.....:|...:| :
  Rat   293 NAVIKEHPELVHPLPCVWNVQLSDHTLAERCYLEAADLKVIHWNSPKKLRVKNKHAEFFRDLH-L 356

  Fly   116 LYL-----LQCH----------PGHDLVRQLCS--------------------IHLYFDVEHLPQ 145
            .:|     |.|.          ||.:.::|..:                    :|:.| :.|.|.
  Rat   357 TFLGFDGKLLCRELFGCPNQFPPGVEQLQQALAQLDEEEPCFEFRQQQLTVHRVHITF-LSHQPP 420

  Fly   146 VVLPPETTL----------REPANC---SGP---------------------PPYENVVKGNMYR 176
            ...|.:.||          ...|.|   .||                     .|..:..|...|.
  Rat   421 PPRPHDVTLVAQLSMDRLQMLEALCRHWRGPMSLALYLTDAEAQQFLRFVETSPVLSARKDVAYH 485

  Fly   177 --SRNTLDYPVNMGRNVARRASLTHYVLASDIELYPTPGLVPDYMH------FLGRQVIGIPGQQ 233
              .|:...||||..||||...:||.||..|||:..|...|. ||:.      .|||       :|
  Rat   486 VVYRDGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLY-DYLRASIEQLALGR-------RQ 542

  Fly   234 PTSPLVHVLRIFEVM-ANVSVPNTKPELQEMLKSGEAVPFHMDICEACHRGPNLEEWINASVVSK 297
            ..:.|  |:..||.: ...|.||:|.||..:|.:|....|........|...:...|..|     
  Rat   543 RKAAL--VVPAFETLHYRFSFPNSKAELLTLLDAGSLHTFRYHEWPQGHASTDYTRWREA----- 600

  Fly   298 ELNVFNVGHRSENNNNWEPIFLGTVEDPPYDERLTWEGQRDKMTQAYAMCVLDYEFHILDNAFLV 362
                 ...:|.:.:.::||..:...:.|.||.|....|. :|:.....:...:|||.:|..||.:
  Rat   601 -----QAPYRVQWSADYEPYVVVPRDCPRYDPRFVGFGW-NKVAHIIELDAQEYEFLVLPEAFSI 659

  Fly   363 HKPGIKQPG---NRKEIFPQARRTNGLIDKKISREMRMMYGS 401
            |.|  ..|.   :|....|..|.....:.::..:::...|||
  Rat   660 HLP--HAPSLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGS 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15483NP_609592.1 Glyco_transf_49 71..399 CDD:290607 93/410 (23%)
Large2XP_006234624.1 GT8_LARGE_C 92..371 CDD:133053 20/78 (26%)
RfaJ 93..>340 CDD:224359 14/46 (30%)
Glyco_transf_49 426..660 CDD:290607 64/254 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339830
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3765
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D729091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.