DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15483 and lge-1

DIOPT Version :9

Sequence 1:NP_609592.1 Gene:CG15483 / 34687 FlyBaseID:FBgn0032457 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_509833.3 Gene:lge-1 / 187206 WormBaseID:WBGene00010716 Length:631 Species:Caenorhabditis elegans


Alignment Length:404 Identity:82/404 - (20%)
Similarity:152/404 - (37%) Gaps:118/404 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TFVLEISCLEN---GTLAKLKKF---------VNCESK--------------------------- 40
            |.:::|.|..|   |.|.|.|:.         .|.::|                           
 Worm   251 TEIIQIPCAYNYQLGALTKSKELCPETPLALHFNSQNKTVGKNYAFFDKIRKAFDEMDGSDLKRR 315

  Fly    41 --AYKSSNA--IYKDYWVLENYVMADH--GDIPCYSNVTYTTHADYTYLDNVVPLLERWRSPLSL 99
              ::|.:|.  |..:|..|:|:.:..:  |.:...:.:...|......|::.:.....||.|:|.
 Worm   316 RRSFKGNNQKDICHEYLPLDNFRIIPNAIGRMTKPAELCMVTQFSKDRLNHFLESANAWRHPIST 380

  Fly   100 AIYAPGTDFEPTIHSILYLLQCHPGHDLVRQLCSIHLYFDVEHLPQVVLPPETTLREPANCSGPP 164
            |:|....|......::.         :|.|...:|||.|:.        |.|:.:          
 Worm   381 AVYGKDKDLLDIAKAVT---------ELNRTDITIHLVFEE--------PTESWM---------- 418

  Fly   165 PYENVVKGNMYRSRNTLD--YPVNMGRNVARRASLTHYVLASDIEL-----YPTPGLVPDYMHFL 222
                            ||  ||:|..||||...:...|:|.:|::.     |.|  ::....:..
 Worm   419 ----------------LDSLYPINFLRNVAIEHANCKYILMTDVDFVVLGDYGT--IIDQTGNLK 465

  Fly   223 GRQVIGIPGQQPTSPLVHVLRIFEVMANVSVPNTKPELQ-EMLKSGEAVPFHMDICEACHRGPNL 286
            .::|:.||..:.|.|        ::..|:|...::.:|. |.|.:.....|...|..:.|...|:
 Worm   466 QKEVLVIPALEMTYP--------QLRLNLSNFLSRKDLVIEHLLNKTIQTFRETIWPSSHVPTNI 522

  Fly   287 EEWINASVVSKELNVFNVGHRSENNNNWEPIFLGTVEDPP-YDERLTWEGQRDKMTQAYAMCVLD 350
            .:||      |....:.|.:    ..|:||.|:...|:.| ||:|....|. :|:|....:.:::
 Worm   523 SKWI------KSNRTYMVNY----EKNYEPYFVIKKEECPFYDQRFGGFGW-NKVTHVMQLKMMN 576

  Fly   351 YEFHILDNAFLVHK 364
            |:|.:...:|::|:
 Worm   577 YKFLVSPTSFMIHQ 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15483NP_609592.1 Glyco_transf_49 71..399 CDD:290607 65/303 (21%)
lge-1NP_509833.3 GT8_LARGE_C 42..317 CDD:133053 10/65 (15%)
RfaJ 62..>288 CDD:224359 9/36 (25%)
Glyco_transf_49 354..603 CDD:290607 65/301 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158811
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3765
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D729091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14638
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5095
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.780

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