DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRP and YKR104W

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_013030.1 Gene:YKR104W / 853979 SGDID:S000001812 Length:306 Species:Saccharomyces cerevisiae


Alignment Length:293 Identity:120/293 - (40%)
Similarity:175/293 - (59%) Gaps:29/293 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1276 SVERIKEYGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKV 1340
            ||||||||.:...|:...:    :.|.||||.|.||.:|..:||.......|..|||.::.|.||
Yeast     3 SVERIKEYTDIPSESNGYI----SPPANWPQTGDVELKNLSLRYSPHSSKALDNVSFKVKAGTKV 63

  Fly  1341 GIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINL 1405
            ||||||||||||:..|::|:.:...|.|:||..||..:.|..||:.::.|||||.||.|::|.||
Yeast    64 GIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDGTVRSNL 128

  Fly  1406 DPFEIKTDDEIWKAL----------EL------------SHLKSFVKSLAAGLNHEIAEGGENLS 1448
            |||:..:|.:|:..|          ||            ||.   :::....||..:..||.|||
Yeast   129 DPFDRYSDVQIYGVLSKVGLIEECDELCLIFEQEQPNFSSHK---LRNRFIDLNTVVKSGGSNLS 190

  Fly  1449 VGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDK 1513
            .|||||:||||::|....::::|||||::|..:|..||||||...|..|:|||||||.:::|.||
Yeast   191 QGQRQLLCLARSMLGARNIMLIDEATASIDYISDAKIQKTIRETMKNTTILTIAHRLRSVIDYDK 255

  Fly  1514 VIVLDKGQIIEFASPTELLDNPKSAFYSMAKDA 1546
            ::|::.|::.|:..|..|:.:..:.||.:.:.:
Yeast   256 ILVMEMGRVKEYDHPYTLISDRNTIFYRLCRQS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 120/293 (41%)
ABC_membrane 338..601 CDD:279056
ABCC_MRP_domain1 649..848 CDD:213217
ABC_membrane 988..1260 CDD:279056
ABCC_MRP_domain2 1308..1528 CDD:213211 102/241 (42%)
YKR104WNP_013030.1 ABCC_NFT1 27..270 CDD:213269 105/245 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344639
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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