DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and ABCC6

DIOPT Version :10

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_187916.3 Gene:ABCC6 / 820497 AraportID:AT3G13090 Length:1466 Species:Arabidopsis thaliana


Alignment Length:1517 Identity:506/1517 - (33%)
Similarity:777/1517 - (51%) Gaps:216/1517 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LDLIMALVKKGGDSELPLYDLDVWGPIIKFATFLLLFIFIPLNRKYGVQTTGCQ-------FIFW 146
            |||::|.:              .||.|   :.:|           :|..|..|:       .::|
plant    94 LDLLLAAL--------------TWGSI---SVYL-----------FGRYTNSCEQKVLFLLRVWW 130

  Fly   147 FLLTVLSIPRCRTEVRLDAERQKILNSQQPSEQDFSWEEYQFVSFFIFFTFTSIMLILNCF---A 208
            ....|:|......:..|..:::.:              ...||...:......:.|..:|.   .
plant   131 VFFFVVSCYHLVVDFVLYKKQEMV--------------SVHFVISDLVGVCAGLFLCCSCLWKKG 181

  Fly   209 DG-------MPRQTKYQRGENE---IPELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQ 263
            :|       .|..:..:..:||   .|...|..|||:::.|...:...|....::.||:..|...
plant   182 EGERIDLLKEPLLSSAESSDNEEVTAPFSKAGILSRMSFSWMSPLITLGNEKIIDIKDVPQLDRS 246

  Fly   264 DSCSEVMPIFAH--HWNQNVRKNYKNKARVEPKAQFSNGNVTFENPHGEKNGRKKGMASIMPPIY 326
            |:...:..||..  .|:...|:                 ..||:               ::..::
plant   247 DTTESLFWIFRSKLEWDDGERR-----------------ITTFK---------------LIKALF 279

  Fly   327 KSFGGVFLFGALMKLFTDTLTFAQPQVLSLIISFVEAQDAEPEWK--GILYAVLLFVLAAAQTFI 389
            .|.....:..||:........:..|.::.   :||:..:...::|  |.:.....||....:...
plant   280 LSVWRDIVLSALLAFVYTVSCYVAPYLMD---NFVQYLNGNRQYKNQGYVLVTTFFVAKLVECQT 341

  Fly   390 LGQYFHRMFIVGLRIRTALINAIYRKALRISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIW 454
            ..|:|.|....||.:|:.|::.||.|.|.:...:|:..|.|||:|||||||.|....:.:::..|
plant   342 QRQWFFRGQKAGLGMRSVLVSMIYEKGLTLPCHSKQGHTSGEIINLMAVDADRISAFSWFMHDPW 406

  Fly   455 SAPLQIGLALYFLWQQLGPSVLAGLAVMIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLS 519
            ...||:.|||:.|::.||...:|.....|:::..|...|...:.:|...||.||.|:|..:|||.
plant   407 ILVLQVSLALWILYKSLGLGSIAAFPATILVMLANYPFAKLEEKFQSSLMKSKDNRMKKTSEVLL 471

  Fly   520 GIKVLKLYAWEPSFEKQVLDIRDKEIATLRSTAY-LNAGTSFLWSCAPFLVSLVTFATYVLTSEA 583
            .:|:|||..||..|..::|::|..|...|:...| .:|..|.||: ||..:|...|...:|.   
plant   472 NMKILKLQGWEMKFLSKILELRHIEAGWLKKFVYNSSAINSVLWA-APSFISATAFGACLLL--- 532

  Fly   584 NQLSVE--KVLVSIALFDLMKLPLTILPMLSVDIAETQVSVNRINKFLNSEELDPNSV--LHDSS 644
             ::.:|  |:|.::|.|.:::.|:..||.....|.:|:||:|||..||..::|..:.|  |...|
plant   533 -KIPLESGKILAALATFRILQGPIYKLPETISMIVQTKVSLNRIASFLCLDDLQQDVVGRLPSGS 596

  Fly   645 KPHPMSIENGEFSWGDEI---TLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGVVN 706
            ....:.|.||.|||.|..   |||::|.:|.:|..||:.|||||||||::.:.|||:.|::|.:.
plant   597 SEMAVEISNGTFSWDDSSPIPTLRDMNFKVSQGMNVAICGTVGSGKSSLLSSILGEVPKISGNLK 661

  Fly   707 TVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGINL 771
            ..|:.||:.|..|||:..|.:|||||:..:|:.|::|::||:|..|::||...|.|.|||:||||
plant   662 VCGRKAYIAQSPWIQSGKVEENILFGKPMEREWYDRVLEACSLNKDLEILPFHDQTVIGERGINL 726

  Fly   772 SGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTFLP 836
            ||||||||.:|||:|.|||:||.|||.||||||.|.|:|:||:  .|:|..|:.:.|||.|.|||
plant   727 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVL--LGLLRHKTVIYVTHQVEFLP 789

  Fly   837 QVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVPELLG 901
            :.|.|.|:|.|:|:::|.:.::                               :.|..|..||:|
plant   790 EADLILVMKDGKITQAGKYHEI-------------------------------LDSGTDFMELVG 823

  Fly   902 TVEKAIKLARTESLSDSISVTSADSLMGGGGSLRRRTKRQDS--HDSVASAASLKKKQE------ 958
                    |.||:|:      :.||...|..|.:..|.:::.  |.        |:|||      
plant   824 --------AHTEALA------TIDSCETGYASEKSTTDKENEVLHH--------KEKQENGSDNK 866

  Fly   959 VEGKLIETEKSQTGGVEFAVYKHYIK-SVGIFLSVATLVLNFVFQAFQIGSNLWLTQWANDQNVA 1022
            ..|:|::.|:.:.|.|.|.|||.|:. :.|..:....||:..:||...||||.|:| |...  |:
plant   867 PSGQLVQEEEREKGKVGFTVYKKYMALAYGGAVIPLILVVQVLFQLLSIGSNYWMT-WVTP--VS 928

  Fly  1023 ND-----TGLRDMYLGVYGAFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFD 1082
            .|     :|.  ..:.||...............::|.:.||:.|..:..::...|.|.|: .|||
plant   929 KDVEPPVSGF--TLILVYVLLAVASSFCILIRALLVAMTGFKMATELFTQMHLRIFRASM-SFFD 990

  Fly  1083 ITPIGRLLNSFSGDMDVVDEELPATMDSFMTFIFMVLATI-------VVISLSTPIFLAVIVPIA 1140
            .||:||:||..|.|..|.|..||.      .|.::.:|.|       |::.::..: |.|.:|:.
plant   991 ATPMGRILNRASTDQSVADLRLPG------QFAYVAIAAINILGIIGVIVQVAWQV-LIVFIPVV 1048

  Fly  1141 FLYYFAQRFYVATSRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVC 1205
            ....:.:::|::.:|:|.||..:||||:..|||||::|.:|||:::...||..:.....|.....
plant  1049 AACAWYRQYYISAARELARLAGISRSPVVHHFSETLSGITTIRSFDQEPRFRGDIMRLSDCYSRL 1113

  Fly  1206 KYPSVIANRWLAIRLEMVGNLIILFASLFAVL----GGQTNPGLVGLSVSYALQVT---QTLNWL 1263
            |:.|..|..||..|||::..  ..|||...:|    .|..||.|.||:::|||.:.   .||.|.
plant  1114 KFHSTGAMEWLCFRLELLST--FAFASSLVILVSAPEGVINPSLAGLAITYALNLNTLQATLIWT 1176

  Fly  1264 VRMSSDIETNIVSVERIKEYGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLR 1328
            :   .|:|..::||||:.:|.....|.|..:|..:.: |:||..|.:...|.||||...|.:||.
plant  1177 L---CDLENKMISVERMLQYTNIPSEPPLVIETTRPE-KSWPSRGEITICNLQVRYGPHLPMVLH 1237

  Fly  1329 GVSFNIQGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQD 1393
            |::....||.|.|||||||.|||:|...||||:|.|.|.|.|||::|.|:|||.|||||:|||||
plant  1238 GLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAGEIRIDGINILSIGLHDLRSRLSIIPQD 1302

  Fly  1394 PVLFSGSLRINLDPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLA 1458
            |.:|.|::|.||||.|..|||:||:||:...|...|:.....|:..::|.|:|.||||||||||.
plant  1303 PTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLG 1367

  Fly  1459 RALLRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQII 1523
            |.||:::|:||||||||::|..||:|||:|:|..|.:|||:|||||:::::|||.|::||:|.|.
plant  1368 RVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIK 1432

  Fly  1524 EFASPTELLDNPKSAFYSMAKD 1545
            |..||..||::..|.|..:..:
plant  1433 EHDSPARLLEDRSSLFSKLVAE 1454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 506/1517 (33%)
ABCC6NP_187916.3 MRP_assoc_pro 190..1449 CDD:188098 485/1372 (35%)

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