DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and ABCC6

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_187916.3 Gene:ABCC6 / 820497 AraportID:AT3G13090 Length:1466 Species:Arabidopsis thaliana


Alignment Length:1517 Identity:506/1517 - (33%)
Similarity:777/1517 - (51%) Gaps:216/1517 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LDLIMALVKKGGDSELPLYDLDVWGPIIKFATFLLLFIFIPLNRKYGVQTTGCQ-------FIFW 146
            |||::|.:              .||.|   :.:|           :|..|..|:       .::|
plant    94 LDLLLAAL--------------TWGSI---SVYL-----------FGRYTNSCEQKVLFLLRVWW 130

  Fly   147 FLLTVLSIPRCRTEVRLDAERQKILNSQQPSEQDFSWEEYQFVSFFIFFTFTSIMLILNCF---A 208
            ....|:|......:..|..:::.:              ...||...:......:.|..:|.   .
plant   131 VFFFVVSCYHLVVDFVLYKKQEMV--------------SVHFVISDLVGVCAGLFLCCSCLWKKG 181

  Fly   209 DG-------MPRQTKYQRGENE---IPELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQ 263
            :|       .|..:..:..:||   .|...|..|||:::.|...:...|....::.||:..|...
plant   182 EGERIDLLKEPLLSSAESSDNEEVTAPFSKAGILSRMSFSWMSPLITLGNEKIIDIKDVPQLDRS 246

  Fly   264 DSCSEVMPIFAH--HWNQNVRKNYKNKARVEPKAQFSNGNVTFENPHGEKNGRKKGMASIMPPIY 326
            |:...:..||..  .|:...|:                 ..||:               ::..::
plant   247 DTTESLFWIFRSKLEWDDGERR-----------------ITTFK---------------LIKALF 279

  Fly   327 KSFGGVFLFGALMKLFTDTLTFAQPQVLSLIISFVEAQDAEPEWK--GILYAVLLFVLAAAQTFI 389
            .|.....:..||:........:..|.::.   :||:..:...::|  |.:.....||....:...
plant   280 LSVWRDIVLSALLAFVYTVSCYVAPYLMD---NFVQYLNGNRQYKNQGYVLVTTFFVAKLVECQT 341

  Fly   390 LGQYFHRMFIVGLRIRTALINAIYRKALRISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIW 454
            ..|:|.|....||.:|:.|::.||.|.|.:...:|:..|.|||:|||||||.|....:.:::..|
plant   342 QRQWFFRGQKAGLGMRSVLVSMIYEKGLTLPCHSKQGHTSGEIINLMAVDADRISAFSWFMHDPW 406

  Fly   455 SAPLQIGLALYFLWQQLGPSVLAGLAVMIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLS 519
            ...||:.|||:.|::.||...:|.....|:::..|...|...:.:|...||.||.|:|..:|||.
plant   407 ILVLQVSLALWILYKSLGLGSIAAFPATILVMLANYPFAKLEEKFQSSLMKSKDNRMKKTSEVLL 471

  Fly   520 GIKVLKLYAWEPSFEKQVLDIRDKEIATLRSTAY-LNAGTSFLWSCAPFLVSLVTFATYVLTSEA 583
            .:|:|||..||..|..::|::|..|...|:...| .:|..|.||: ||..:|...|...:|.   
plant   472 NMKILKLQGWEMKFLSKILELRHIEAGWLKKFVYNSSAINSVLWA-APSFISATAFGACLLL--- 532

  Fly   584 NQLSVE--KVLVSIALFDLMKLPLTILPMLSVDIAETQVSVNRINKFLNSEELDPNSV--LHDSS 644
             ::.:|  |:|.::|.|.:::.|:..||.....|.:|:||:|||..||..::|..:.|  |...|
plant   533 -KIPLESGKILAALATFRILQGPIYKLPETISMIVQTKVSLNRIASFLCLDDLQQDVVGRLPSGS 596

  Fly   645 KPHPMSIENGEFSWGDEI---TLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGVVN 706
            ....:.|.||.|||.|..   |||::|.:|.:|..||:.|||||||||::.:.|||:.|::|.:.
plant   597 SEMAVEISNGTFSWDDSSPIPTLRDMNFKVSQGMNVAICGTVGSGKSSLLSSILGEVPKISGNLK 661

  Fly   707 TVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGINL 771
            ..|:.||:.|..|||:..|.:|||||:..:|:.|::|::||:|..|::||...|.|.|||:||||
plant   662 VCGRKAYIAQSPWIQSGKVEENILFGKPMEREWYDRVLEACSLNKDLEILPFHDQTVIGERGINL 726

  Fly   772 SGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTFLP 836
            ||||||||.:|||:|.|||:||.|||.||||||.|.|:|:||:  .|:|..|:.:.|||.|.|||
plant   727 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVL--LGLLRHKTVIYVTHQVEFLP 789

  Fly   837 QVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVPELLG 901
            :.|.|.|:|.|:|:::|.:.::                               :.|..|..||:|
plant   790 EADLILVMKDGKITQAGKYHEI-------------------------------LDSGTDFMELVG 823

  Fly   902 TVEKAIKLARTESLSDSISVTSADSLMGGGGSLRRRTKRQDS--HDSVASAASLKKKQE------ 958
                    |.||:|:      :.||...|..|.:..|.:::.  |.        |:|||      
plant   824 --------AHTEALA------TIDSCETGYASEKSTTDKENEVLHH--------KEKQENGSDNK 866

  Fly   959 VEGKLIETEKSQTGGVEFAVYKHYIK-SVGIFLSVATLVLNFVFQAFQIGSNLWLTQWANDQNVA 1022
            ..|:|::.|:.:.|.|.|.|||.|:. :.|..:....||:..:||...||||.|:| |...  |:
plant   867 PSGQLVQEEEREKGKVGFTVYKKYMALAYGGAVIPLILVVQVLFQLLSIGSNYWMT-WVTP--VS 928

  Fly  1023 ND-----TGLRDMYLGVYGAFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFD 1082
            .|     :|.  ..:.||...............::|.:.||:.|..:..::...|.|.|: .|||
plant   929 KDVEPPVSGF--TLILVYVLLAVASSFCILIRALLVAMTGFKMATELFTQMHLRIFRASM-SFFD 990

  Fly  1083 ITPIGRLLNSFSGDMDVVDEELPATMDSFMTFIFMVLATI-------VVISLSTPIFLAVIVPIA 1140
            .||:||:||..|.|..|.|..||.      .|.::.:|.|       |::.::..: |.|.:|:.
plant   991 ATPMGRILNRASTDQSVADLRLPG------QFAYVAIAAINILGIIGVIVQVAWQV-LIVFIPVV 1048

  Fly  1141 FLYYFAQRFYVATSRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVC 1205
            ....:.:::|::.:|:|.||..:||||:..|||||::|.:|||:::...||..:.....|.....
plant  1049 AACAWYRQYYISAARELARLAGISRSPVVHHFSETLSGITTIRSFDQEPRFRGDIMRLSDCYSRL 1113

  Fly  1206 KYPSVIANRWLAIRLEMVGNLIILFASLFAVL----GGQTNPGLVGLSVSYALQVT---QTLNWL 1263
            |:.|..|..||..|||::..  ..|||...:|    .|..||.|.||:::|||.:.   .||.|.
plant  1114 KFHSTGAMEWLCFRLELLST--FAFASSLVILVSAPEGVINPSLAGLAITYALNLNTLQATLIWT 1176

  Fly  1264 VRMSSDIETNIVSVERIKEYGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLR 1328
            :   .|:|..::||||:.:|.....|.|..:|..:.: |:||..|.:...|.||||...|.:||.
plant  1177 L---CDLENKMISVERMLQYTNIPSEPPLVIETTRPE-KSWPSRGEITICNLQVRYGPHLPMVLH 1237

  Fly  1329 GVSFNIQGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQD 1393
            |::....||.|.|||||||.|||:|...||||:|.|.|.|.|||::|.|:|||.|||||:|||||
plant  1238 GLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAGEIRIDGINILSIGLHDLRSRLSIIPQD 1302

  Fly  1394 PVLFSGSLRINLDPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLA 1458
            |.:|.|::|.||||.|..|||:||:||:...|...|:.....|:..::|.|:|.||||||||||.
plant  1303 PTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLG 1367

  Fly  1459 RALLRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQII 1523
            |.||:::|:||||||||::|..||:|||:|:|..|.:|||:|||||:::::|||.|::||:|.|.
plant  1368 RVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIK 1432

  Fly  1524 EFASPTELLDNPKSAFYSMAKD 1545
            |..||..||::..|.|..:..:
plant  1433 EHDSPARLLEDRSSLFSKLVAE 1454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 506/1517 (33%)
ABC_membrane 338..601 CDD:279056 81/267 (30%)
ABCC_MRP_domain1 649..848 CDD:213217 105/201 (52%)
ABC_membrane 988..1260 CDD:279056 87/290 (30%)
ABCC_MRP_domain2 1308..1528 CDD:213211 120/219 (55%)
ABCC6NP_187916.3 PLN03232 67..1452 CDD:215640 506/1513 (33%)
ABC_membrane 286..555 CDD:294371 82/276 (30%)
ABCC_MRP_domain1 601..801 CDD:213217 105/201 (52%)
ABC_membrane 902..1173 CDD:294371 87/285 (31%)
ABCC_MRP_domain2 1217..1437 CDD:213211 120/219 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 178 1.000 Domainoid score I1063
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0000087
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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