DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and abcb9

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001119906.1 Gene:abcb9 / 570148 ZFINID:ZDB-GENE-050517-12 Length:789 Species:Danio rerio


Alignment Length:649 Identity:171/649 - (26%)
Similarity:294/649 - (45%) Gaps:116/649 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   940 RQDSHDSVASAASLKKKQEVEGKLIETEKSQTGGVEFAVYKH----------YIKSVGIFLSVA- 993
            |:||.|:         ::.|:....|:|||...|.|   :.|          |.|.....||:| 
Zfish   147 REDSEDT---------ERLVDETEDESEKSMKSGKE---HTHSGATIGRLLSYCKKDSSLLSIAF 199

  Fly   994 -TLVLNFVFQAFQIGSNLWLTQWANDQNV---ANDTGLRDMY-LGVYG-----AFGFGQGVLAY- 1047
             .|:|:.|.:||    ..:.|..|.|..|   :.|...:.|. |.|..     |.||..||.:. 
Zfish   200 FFLLLSAVCEAF----IPYYTGQAIDGIVIQKSMDHFAKPMITLSVLALVSSIAIGFRGGVFSVT 260

  Fly  1048 FAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITPIGRLLNSFSGD----MDVVDEELPATM 1108
            ||.:.:.|........:|.|:          .|||....|.:.:..:.|    .|::.:.:...:
Zfish   261 FARLNIRLRNLLFRSLMHQEI----------GFFDANHTGDITSRLTSDTTQVSDLISQNVNLFL 315

  Fly  1109 DSFM----TFIFMV-----LATIVVISLSTPIFLAVIVPIAFLYYFAQRFYVATSRQLMRLESVS 1164
            .||:    .||||.     |:.:.::...   ::||:..:...||......|.|:  |.:...|:
Zfish   316 RSFVKAVGIFIFMFGMSWKLSVVTIMGFP---YIAVVSKLYGEYYKKLTKEVQTA--LAQANKVA 375

  Fly  1165 RSPIYSHFSETVTGASTIRAY----NVGDRFIEESDAK--VDKNQVCKYPSVIANRWLAIRLEMV 1223
                    .||::...|:|::    ..||.:.......  ::|.|...|...:   |.:...|:.
Zfish   376 --------EETISAMRTVRSFANEDQEGDMYYSRLQEMFVLNKKQAIAYACFM---WSSYISELA 429

  Fly  1224 GNLIILFASLFAVLGGQTNPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKEYGETK- 1287
            ..:.|||.....|:..|.:.|.:...|.|.|::.:.|..:..:.:.:...:.:.|::.||.:.| 
Zfish   430 LQVAILFYGGHLVVTNQMSGGTLISFVIYELELGEALESISSVYTGLMQGVGAAEKVFEYIDRKP 494

  Fly  1288 ------QEAPWELEQDKNKPKNWPQEGRVEFQNFQVRY--REGLDLVLRGVSFNIQGGEKVGIVG 1344
                  ||||..|            ||:|||.|....|  |..:| ||:.|||:::.|:...:||
Zfish   495 KHALNGQEAPETL------------EGQVEFNNVTFAYPSRPEMD-VLKNVSFSLRPGQVTALVG 546

  Fly  1345 RTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINLD--- 1406
            .:|.||||....|........|::.:||..:.:.......|::.::.|:||||:.::::|:.   
Zfish   547 PSGGGKSSCVCLLENFYAPQQGQVLVDGRPVNTYQHKYYHSKVALVAQEPVLFARTVQMNISYGV 611

  Fly  1407 ---PFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVL 1468
               |.|     .:.:|...::...|:..|:.|.:..:.|.|..||.||:|.|.:||||:|..::|
Zfish   612 PEAPME-----AVIRAAINANAHDFITGLSKGYDSGVGEKGTQLSGGQKQRVAIARALIRSPRIL 671

  Fly  1469 VLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELL 1532
            :|||||:|:|.|::.::|:.:....:|.|||.|||||:|:..:|.::|:|||.::|.....||:
Zfish   672 ILDEATSALDSESEYIVQQALNNLMREHTVLVIAHRLSTVERADNILVIDKGSVVEQGPHAELM 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 171/649 (26%)
ABC_membrane 338..601 CDD:279056
ABCC_MRP_domain1 649..848 CDD:213217
ABC_membrane 988..1260 CDD:279056 67/302 (22%)
ABCC_MRP_domain2 1308..1528 CDD:213211 77/227 (34%)
abcb9NP_001119906.1 3a01208 46..745 CDD:273363 171/649 (26%)
ABC_membrane 199..458 CDD:279056 62/288 (22%)
P-loop_NTPase 500..725 CDD:304359 82/242 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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