DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and cftr

DIOPT Version :10

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001038348.1 Gene:cftr / 559080 ZFINID:ZDB-GENE-050517-20 Length:1485 Species:Danio rerio


Alignment Length:1502 Identity:402/1502 - (26%)
Similarity:689/1502 - (45%) Gaps:266/1502 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRKNYKNKA 289
            |...|:.|||..:.|.:.:..||::..|...|::....||:...:.......|::.|        
Zfish     5 PVEDANCLSRYFFWWTNPIMRKGFKEKLRPSDVYQAPSQDAADILAERLEKEWDREV-------- 61

  Fly   290 RVEPKAQFSNGNVTFENPHGEKNGRKK-GMASIMPPIY-KSFGGVFLFGALMKLFTDTLTFAQPQ 352
                                 .:|:|| .:...|...| |.|   .|||.|:.:...|.| .|||
Zfish    62 ---------------------ASGKKKPSLLRAMARCYIKPF---LLFGFLLYIGEATKT-VQPQ 101

  Fly   353 VLSLII-SFVEAQDAEPE-WKGILYAVLLFVLAAAQTFILGQYFHRMFIVGLRIRTALINAIYRK 415
            :|..|| ||..|.  ||| ..|...|..|.:|..|:..:|......:..:|::||.||.:.||:|
Zfish   102 LLGRIIASFDPAH--EPERANGYFLAFGLGLLFTARFLLLQPAMFGLHHLGMQIRIALFSIIYKK 164

  Fly   416 ALRISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYFLWQQLGPSVLAGLA 480
            .|::|:....:.:.|::|:||:.:..:|.:.....:.||.:|||..|....:|:.:..:....||
Zfish   165 TLKLSSRVLDKISTGQLVSLMSANLGKFDQSLGMAHFIWISPLQCILCTGLIWELIDVNSFCALA 229

  Fly   481 VMIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEI 545
            .:.:|..:...::.::..|:.:::...::|:.|.:|::..:..:|.|.||...|..:.:||..|:
Zfish   230 AISLLGVLQAFLSHKMGPYKAQKVLLTNKRLALTSEIMENLHSVKAYGWEEIMETLIKNIRQDEV 294

  Fly   546 ATLRSTAYLNAGTSFLWSCAPFLVSL-VTFATYVLTSEANQLSVEKVLVSIALFDLMKLPLTILP 609
            ...|....|.    :.:|.|.|..:: |..|..|..:.:..:::.::..:::.  .|.|.:|:..
Zfish   295 KLTRKIGSLR----YFYSSAYFFSAIFVIVAAVVPHALSRGINLRRIFTTLSY--CMVLRMTVTR 353

  Fly   610 MLSVDIA---ETQVSVNRINKFLNSEELDPNSVLHDSSKPHPMSIENGEFSW------------- 658
            .|...|.   :|...:.:|.:||:.||.  ..:.:|.|... :.:::...||             
Zfish   354 QLPGSIQMWYDTMRLIWKIEEFLSKEEY--KLMEYDLSITE-LELQDVTASWDEGPGELLERIKQ 415

  Fly   659 ---------GD----------EITLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGV 704
                     ||          ...|::|::::|||.::|:.|::||||||::...|||:...:|.
Zfish   416 ENKANGHHNGDAGLFFTNLYVAPVLKDISLKLKKGEMLAVTGSMGSGKSSLLMTILGELVPSSGK 480

  Fly   705 VNTVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGI 769
            :...|:::|..|.|||...|:|||||||.|||..||..|:.||.|..|:..|...|.|.:.|.|:
Zfish   481 IRHSGRISYSSQTAWIMPGTIRDNILFGLTYDEYRYKSVVKACQLEEDLAALPEKDKTPMAEGGL 545

  Fly   770 NLSGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTF 834
            |||||||.|::||||||.||||||||.|.:.:|....|.||::.:..  ::|.|:|:|||:.:..
Zfish   546 NLSGGQKARVALARAVYRDADLYLLDAPFTHLDIATEKEIFDKCLCK--LMASKTRILVTNKIEH 608

  Fly   835 LPQVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKR----------- 888
            |.:.|.|.::..||....|||.:|...:..|:..::     |.|..:.::..:|           
Zfish   609 LKRADKILLLHNGESFFYGTFPELQSERPDFSSLLL-----GLEAYDNISAERRCSILTETLHRV 668

  Fly   889 ----------QISSTADVPEL----------------LGTVEKA--IKLARTE---SLSD-SISV 921
                      :.|:...||..                ||...||  |::...|   :|.| ..|:
Zfish   669 SVDESAGMQPERSAFRQVPPTKPMYIDERKASVIVNPLGVARKASFIQVPEEEVRRTLPDRKFSL 733

  Fly   922 TSA-----DSLMG---------------------------GGG-------SLRRR---------- 937
            ...     :|.||                           |.|       |.|||          
Zfish   734 VPENELVDESFMGSDVYHNHGVHMAGQRRQSVLAFMTNAQGQGRREHLQSSFRRRLSVVPQSELA 798

  Fly   938 ------TKRQDSHDSVASAASLKKKQEVEGKL----------IETEKSQTGGVEFAVYKHYIKS- 985
                  |:|..  ||......:.:::.:|..|          .||.|..|       |..|:.: 
Zfish   799 SELDIYTRRLS--DSTYDMTGILEEENIEACLTDEIDEIEETFETTKWNT-------YVRYVSNN 854

  Fly   986 -------VGIFLSVATLVLNFVFQAFQIGSNLW----------LTQWANDQN--------VANDT 1025
                   :.|....|..:...|...|.|...||          :|:.:|..:        |...:
Zfish   855 KSLLYVLIFILFIAAIEIAGSVAGIFLITDELWREEHQRSEPNMTKHSNASSSGQTYAITVTPTS 919

  Fly  1026 GLRDMYLGVYG-----AFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITP 1085
            ....:|:.|..     |.||.:|:......:.:       :|.:|.::|..::...: ...:...
Zfish   920 SYYILYIYVATSESLLAMGFFRGLPFVHTTITI-------SKKLHQKMLHAVLSAPM-SVLNTMK 976

  Fly  1086 IGRLLNSFSGDMDVVDEELPATMDSFMTFIFMVLATIVVISLSTP-IFLAVIVPIAFLYYFAQRF 1149
            .||::|.|:.||..:|:.||..|..|:....:|:..|:|:|:..| ||||. .|:|.::...:::
Zfish   977 TGRIMNRFTKDMATIDDMLPLLMFDFVQLTVVVVGCILVVSIVRPYIFLAA-TPLAIIFIVMRKY 1040

  Fly  1150 YVATSRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANR 1214
            ::.|.:||.:||:.:||||:||...::.|..||||:.....|.......::.:....:..:...|
Zfish  1041 FLRTGQQLKQLETEARSPIFSHLIMSLKGLWTIRAFERQAYFEALFHKTLNTHTATWFLYLSTLR 1105

  Fly  1215 WLAIRLEMVGNLIILFASLFAVLGGQTNPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVER 1279
            |...|.:::.......|:..||...|..||.:|:.:..|:.:..|..|.|..|..::..:.||:|
Zfish  1106 WFLFRADILFVFFFTLAAWIAVGTNQDKPGEIGIIICLAMLILGTFQWCVATSIAVDGMMRSVDR 1170

  Fly  1280 IKEYGETKQEAPWELEQDKNK-------------PKNWPQEGRVEFQNFQVRYREGLDLVLRGVS 1331
            :.::.:...|.|   :.||.|             ..:||..|::|.:|..|:|.|....||:.:|
Zfish  1171 VFKFIDLPSETP---KPDKGKDSDLIIENVDAQADSSWPHRGQIEVRNLTVKYTEAGHAVLKNLS 1232

  Fly  1332 FNIQGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVL 1396
            |:.:|.::|||:||||:|||||..||.::: ...|.||||||:...|.|...|....::||...:
Zfish  1233 FSAEGRQRVGILGRTGSGKSSLFNALLKLV-YTDGEISIDGVNWNKMPLQKWRKAFGVVPQKVFI 1296

  Fly  1397 FSGSLRINLDPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARAL 1461
            |:|.||:||||:...:|:|:|:..|...||:.::.....|:.::..||..||.|.:||:||||::
Zfish  1297 FTGPLRMNLDPYGCHSDEELWRVAEEVGLKTVIEQFPDKLDFQLEYGGYVLSNGHKQLICLARSI 1361

  Fly  1462 LRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFA 1526
            |...::|:|||.:|.:|..|..:::||:|..|..||:|...|::..:|:....:::||||:..:.
Zfish  1362 LSGARILLLDEPSAHLDPVTIKVLKKTLRQSFSTCTILLSEHKVEPLLECQSFLMMDKGQVKTYD 1426

  Fly  1527 SPTELLD 1533
            |..:||:
Zfish  1427 SIQKLLN 1433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 402/1502 (27%)
cftrNP_001038348.1 CFTR_protein 1..1485 CDD:273530 402/1502 (27%)
Disordered R region. /evidence=ECO:0000250|UniProtKB:P13569 653..826 26/174 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1452..1485
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P13569 1483..1485
Blue background indicates that the domain is not in the aligned region.

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