DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and Cftr

DIOPT Version :10

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_651269.1 Gene:Cftr / 42928 FlyBaseID:FBgn0039207 Length:1402 Species:Drosophila melanogaster


Alignment Length:1421 Identity:476/1421 - (33%)
Similarity:730/1421 - (51%) Gaps:167/1421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRKNYKNKA 289
            |...|:.:|::.:.|...:..:|.|..|...||.....:|...::.......|.:.:.::::.|.
  Fly    12 PRQHANIISQLIFAWAIPLLYRGSRRGLNTDDLTQCLKEDRSEQLGDRLEDQWFKELERSHRKKQ 76

  Fly   290 RVE--------------------------------------------PKAQFSNGNVTFENPHGE 310
            :..                                            |.||..|.:|...:....
  Fly    77 KPHLRNALFRCFLGPTIINGLICFIYIVIKTLIPAVLAQLLIQFQKTPVAQLRNIDVNDISISDS 141

  Fly   311 KNGRKKGMAS--IMPPIYKSFG--GVFLF-------GALMKLFTDTLTFAQPQV------LSLII 358
            .|...:.:.:  :...:..|.|  |..||       |.|..:        ||.|      .:.:.
  Fly   142 LNRTARAIPNYVLSQAVANSSGSPGDALFPKSLDKAGPLEPI--------QPPVEEVDHNATAVR 198

  Fly   359 SFVEAQDAEPEWKGI--LYAVL----LFVLAAAQTFILGQYFHRMFIVGLRIRTALINAIYRKAL 417
            |.:: |..|..|..:  |.|||    ||.     .|:|.....|..::|.|:|.|..:.||||.|
  Fly   199 SILD-QTVEHMWNDMNSLGAVLVLSTLFC-----CFLLHHVDLRQRLMGARMRIACCSLIYRKTL 257

  Fly   418 RISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYFLWQQLG-PSVLAGLAV 481
            |:|..|..::..|.::||::.|..|......:::.||..|||..|..|.:|..:| |:::..:.:
  Fly   258 RLSMKTAGQTPAGYLINLLSNDVNRLDYGFIFMHWIWIMPLQAMLTCYLIWLNIGIPAIVGVVGL 322

  Fly   482 MIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEIA 546
            ::..:||...::......::|..:..|.||.:|||::.||:|:|:||||..|:..|.:.|..||.
  Fly   323 LLKTVPVQTALSKVTSVLRMRIAERTDARVGIMNELVQGIQVIKMYAWEKPFQAVVAEARRSEIK 387

  Fly   547 TLRSTAYLNAGTSFLWSCAPFLVSLVTF---ATYVLTSEA-----NQLSVEKVLVSIALFDLMKL 603
            .:|..:||..          |.:|.:.|   :|..:|..|     ..::.:.|..:.:.:::::|
  Fly   388 QIRYASYLRG----------FYLSTMVFTERSTLYITLAAAALMGQTITADFVFSAASYYNILQL 442

  Fly   604 PLTILPMLSVDI-AETQVSVNRINKFLNSE--ELDPNSVLH----DSSKPHPMSIENGEFSWGDE 661
            ...|...|:|.. ||..||:.||..||..|  |.....:.|    :......::|::...||..|
  Fly   443 VAAIWYPLAVSFGAEALVSLRRIQDFLMLEGREERTQGLTHKRDQEGGDSRAVTIKDINASWDIE 507

  Fly   662 ---ITLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGVVNTVGKLAYVPQQAWIQNA 723
               .||::||::::||.|.|::|.||:||||::|..|||:..:.|.|...|.|:|..|:.|:...
  Fly   508 KPQKTLQSINLQIEKGQLCAVIGPVGAGKSSILQLLLGELPVIDGGVFIQGDLSYAAQEPWLFTG 572

  Fly   724 TVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGINLSGGQKQRISLARAVYSD 788
            :||:|||||:.:|||||.:|...|||..|...|..||.|.:||:|.:|||||:.|||||||||..
  Fly   573 SVRNNILFGEEFDRKRYQEVTRCCALSTDFQQLPNGDKTLVGERGASLSGGQRARISLARAVYKP 637

  Fly   789 ADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILA--RKSRVLVTHGVTFLPQVDSIYVIKMGEISE 851
            |.:||:||||||||||||:|:|:|||||:|.||  :.:|:||||.|.||.:.|.|.::..|.|..
  Fly   638 AQIYLMDDPLSAVDAHVGRHLFDEVIGPRGRLAQLKATRILVTHQVHFLSEADVIVIVDQGRILR 702

  Fly   852 SGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVPELLGTVEKAIKLARTESLS 916
            .||:.:|:.:...||     .|.|..:||||....:.|.|     |..:.::|           |
  Fly   703 QGTYQELINSDLDFA-----RLLERPKEEEEGENSRNQTS-----PLSVNSLE-----------S 746

  Fly   917 DSISVTSADSLMGGGGSLRRRTKRQDSHDSVASAASLKKKQ----EVEGKLIETEKSQTGGVEFA 977
            |...:...|.:..|...||:::      .||..:.||...|    ..|..|.|.:.|  ||:...
  Fly   747 DDEDIPFIDGVKDGYQQLRKQS------SSVHGSKSLDSTQLDDNVDEDDLAEAQAS--GGISPR 803

  Fly   978 VYKHYIKSVGIFLSVATLVLNFVFQAFQIGS-----NLWLTQ-WANDQNVANDTGLRDMYLGVYG 1036
            |:..|..:....||.:.:|...|.......|     |:|..| ....|..|..:....||  :||
  Fly   804 VWYEYFHAGSTLLSFSFMVFVMVMSQVVCSSSDFFANIWTQQEHQRSQGEATFSTFECMY--IYG 866

  Fly  1037 AFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITPIGRLLNSFSGDMDVVD 1101
            |......::..|...:.:.....|:|.:|:.:.|.|:..:: ||||.||.||:||.||.||..:|
  Fly   867 ALIIAVVIMTTFRGFLFFKICMHASKVLHDRMFACILHATM-RFFDTTPSGRILNRFSKDMGAID 930

  Fly  1102 EELPATMDSFMTFIFMVLATIVVISLSTPIFLAVIVPIAFLYYFAQRFYVATSRQLMRLESVSRS 1166
            |.||..|..|:....::...::||.:..|:.:|.::.:|.:.....:.|:..|:.|.|||.:.||
  Fly   931 ELLPRAMMDFIQIALVMFGILIVIGILNPVLVAAMLVVAVVDVLILKLYLRPSQDLKRLEGICRS 995

  Fly  1167 PIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANRWLAIRLEMVGNLIILFA 1231
            |::||.|.::||.:.||:..:.|...:|.|...|.:......::..|..|.:.|:.|..:.:...
  Fly   996 PVFSHLSASLTGLAIIRSRQLQDVVAKEFDLLQDVHSSVWQLTMAVNTTLGLWLDCVSCIFLTSV 1060

  Fly  1232 SLFAVLGGQTN-PGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKEYGETKQEAPWELE 1295
            :...::..:|. .|.|||:::.|:.:|..:.:.||..::....:.||||:.:|.|.:||...   
  Fly  1061 TFSFIISSETTYSGNVGLAIAQAMILTGMVQYGVRQVAESLQQMTSVERVLQYTELEQEPAL--- 1122

  Fly  1296 QDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKVGIVGRTGAGKSSLTLALFRI 1360
            .:|..|:.||..|:|||:|...||......|||.::..|:.|.|||||||||||||||..||||:
  Fly  1123 GEKTPPQQWPTRGQVEFRNMSCRYDPNGSPVLRNLNLTIEAGWKVGIVGRTGAGKSSLIGALFRL 1187

  Fly  1361 --IEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINLDPFEIKTDDEIWKALELS 1423
              ||   |.|.|||::..::.|.:||:|::||||||||||.::|.||||||..||.|:|.|||..
  Fly  1188 AHIE---GEIFIDGIETGTISLEILRTRISIIPQDPVLFSATIRYNLDPFERYTDAELWSALEDV 1249

  Fly  1424 HLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKT 1488
            .|:..:    .||::.:.|.|.|.|||||||:|||||:||..||||||||||.||.:||.|||:|
  Fly  1250 ELRKAI----PGLDYMVTERGGNFSVGQRQLLCLARAILRNNKVLVLDEATANVDPQTDALIQRT 1310

  Fly  1489 IRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLDNPKSAFYSMAK 1544
            ||.:||:|||||:||||:|::|||::||:|.|..:||..|..||...:.....|.:
  Fly  1311 IRIKFKQCTVLTVAHRLHTVMDSDRIIVMDAGVAVEFDVPYLLLKKSQGHLRQMVE 1366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 476/1421 (33%)
CftrNP_651269.1 MRP_assoc_pro 12..1356 CDD:188098 475/1409 (34%)

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