DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and tap2a

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001006594.1 Gene:tap2a / 368771 ZFINID:ZDB-GENE-030616-245 Length:725 Species:Danio rerio


Alignment Length:621 Identity:152/621 - (24%)
Similarity:296/621 - (47%) Gaps:78/621 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   957 QEVEGKLIETEKSQTGGVEF----AVYK-HYIKSVGIFLSVATLVLNFVFQAFQIGSNLWLT--- 1013
            :|..||    |:.|...|.|    .:|: .||...|.|:.:|..||..:|.....|..:.:.   
Zfish   124 EESNGK----ERKQKARVLFIRVIRLYRPDYILLFGAFVFLALAVLCEMFIPLYTGEVIDILGSH 184

  Fly  1014 -QWANDQNVANDTGLRDMYLGVY---GAFGFG-QGVLAYFAVVIVYLGGFQAAKTIHNELLAVII 1073
             ||.|.::..       :::|::   .:|..| :|.|...|:     ..|.....:  :|...:|
Zfish   185 YQWDNFRSAI-------IFMGLFSLGSSFSAGCRGGLFMCAI-----NSFTCRVKV--QLFGSLI 235

  Fly  1074 RGSVCRFFDITPIGRLLNSFSGDMDVVDEELPATMDSFMTFIFMVLATI-VVISLSTPIFLAVIV 1137
            |..: .||:....|.:.:..|.|..::...:...::..:..:...|..: :::|||..:.|.:::
Zfish   236 RQDI-GFFETIKTGDITSRLSTDTTLMGRAVALNVNVLLRTLVKTLGMLYLMVSLSWKLTLLMLM 299

  Fly  1138 --PIAFLYYFAQRFYVATSRQLMRLESVSRSPIYSHFSETVTGASTIRAY--NVGD------RFI 1192
              |:..|   .|..|....::|.:....|.:.......|.|:|..|::::  .:|:      |.:
Zfish   300 ETPLTGL---LQNIYDTHYQKLSKEVQDSMAQANDAAGEAVSGIRTVKSFKTELGEAHRYDGRLM 361

  Fly  1193 EESDAKVDKNQV-CKYPSVIANRWLAIRLEMV--GNLIILFASLFAVLGGQTNPGLVGLSVSYAL 1254
            |..:.|..::.| ..|..:.....|.:::.|:  |.|.|.:        ||.:.|.:...:.|..
Zfish   362 ETHNLKTRRDTVRAIYLLIRRMTELGMKVAMLYYGRLFIQY--------GQMSTGNLVSFILYQQ 418

  Fly  1255 QVTQTLNWLVRMSSDIETNIVSVERIKEYGETKQEAPWELEQDKN-KPKNWPQEGRVEFQNFQVR 1318
            .:...:..|:.:..|:..::.:..::.||.:.|.    |:..|.| .||:  .:|.|:||.....
Zfish   419 DLGDNIRTLIYIFGDMLNSVGAAGKVFEYQDRKS----EVSIDGNLMPKD--LKGHVKFQKLTFS 477

  Fly  1319 YREGLD-LVLRGVSFNIQGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHM 1382
            |....| .||:..|..::.|:...:||.:|.|||:....|.|..:...|.|.:||..:.......
Zfish   478 YPRRPDHNVLKDFSLELKPGQITALVGMSGGGKSTCVSLLERFYQPQQGTILLDGKPLQDYQHKY 542

  Fly  1383 LRSRLTIIPQDPVLFSGSLRINLDPFEIK--TDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGE 1445
            |.|::.::.|:||||||::|.|: .:.::  :.:.:.:|...::..||:..|..|.:.::.|.|.
Zfish   543 LHSKVAMVGQEPVLFSGTVRDNI-AYGLQGCSMERVKEAASKANAHSFISKLEKGYDTDVGERGN 606

  Fly  1446 NLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKEC----TVLTIAHRLN 1506
            .||.|::|.:.:||||:|:.:||:|||.|:::|.|::.::|:.:     .|    |:|.|||||.
Zfish   607 LLSGGEKQRIAIARALIREPQVLILDEVTSSLDTESEQMVQQAL-----SCCPTQTLLVIAHRLK 666

  Fly  1507 TILDSDKVIVLDKGQIIEFASPTELLDNPKSAFYSM 1542
            ||..:|:::|:|.|:::|..:..||::. |.::|.:
Zfish   667 TIERADQIVVIDSGELVEKGTHEELMEK-KGSYYKL 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 152/621 (24%)
ABC_membrane 338..601 CDD:279056
ABCC_MRP_domain1 649..848 CDD:213217
ABC_membrane 988..1260 CDD:279056 54/293 (18%)
ABCC_MRP_domain2 1308..1528 CDD:213211 73/226 (32%)
tap2aNP_001006594.1 MdlB 136..708 CDD:224055 147/605 (24%)
ABC_membrane 157..417 CDD:279056 53/285 (19%)
ABCC_TAP 458..682 CDD:213215 75/231 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.