DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and abcc4

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001007039.2 Gene:abcc4 / 368620 ZFINID:ZDB-GENE-030616-511 Length:1331 Species:Danio rerio


Alignment Length:1367 Identity:511/1367 - (37%)
Similarity:755/1367 - (55%) Gaps:143/1367 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRKNYKNKA 289
            |..||:..|:|.:.|.:.:...|.:..|||.|::::.|:|...::......:|:|.     |.||
Zfish    16 PSASANLFSQIFFCWLNPLFSIGSKRRLEEDDMFNVLPEDRSKKLGEELQSYWDQE-----KEKA 75

  Fly   290 RVEPKAQFSNGNVTFENPHGEKNGRKKGMASIMPPIYKSFG--GVFLFGALMKLFTDTLTFAQPQ 352
            ..|.|.                   .|...:|:...:||:.  |||      .|..:::...||.
Zfish    76 AKELKT-------------------PKLTKAIIRCYWKSYAVLGVF------TLIEESIKVIQPV 115

  Fly   353 VLSLIISFVE-----AQDAEPEWKGILYAVLLFVLAAAQTFILGQYFHRMFIVGLRIRTALINAI 412
            .|..:|.:.|     ...|..|..|....|.|..|..|....|  ||:.:...|::||.|:.:.|
Zfish   116 FLGKLIKYFENYRHDDMAALSEAYGYATGVCLSTLGLALLHHL--YFYHVQRAGMKIRIAMCHMI 178

  Fly   413 YRKALRISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYFLWQQLGPSVLA 477
            |||||.:|.:...::|.|:||||::.|..:|.|||.:|:.:|..|||....:..|||::|||.||
Zfish   179 YRKALCLSAAAMGQTTTGQIVNLLSNDVNKFDELTIFLHFLWVGPLQAAAVIGLLWQEIGPSCLA 243

  Fly   478 GLAVMIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRD 542
            |:||::.|:|:..:.......|:.:.....|.|::.||||:|||:::|:||||..|...|.|:|.
Zfish   244 GMAVLVFLMPLQTMFGKLFSKYRSKTAALTDSRIRTMNEVVSGIRIIKMYAWEKPFAMLVNDVRR 308

  Fly   543 KEIATLRSTAYLNAGTSFLWSCAPFLVSLVTFATYVLTSEANQLSVEKVLVSIALFDLMKLPLTI 607
            |||:.:.|::||.......:..|..::..|||..|||.  .|.:|..:|.|:::|:..::|.:|:
Zfish   309 KEISKIMSSSYLRGLNMASFFTANKIILFVTFTVYVLV--GNTMSASRVFVAVSLYSAVRLTVTL 371

  Fly   608 -LPMLSVDIAETQVSVNRINKFLNSEELDPNSV-LHDSSKPHPMSIENGEF--SWG---DEITLR 665
             .|.....::|:.:|:.||.|||..:||..|.: |....|..| |:|..:.  .|.   |..||:
Zfish   372 FFPAAIEKVSESAISIRRIKKFLLLDELVKNHLPLSQEEKKEP-SVEMQDLICYWDKTLDAPTLQ 435

  Fly   666 NINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGVVNTVGKLAYVPQQAWIQNATVRDNIL 730
            |:...||.|.|:|::|.||:||||::...|||:....||:...|:|.|..||.|:...|:|.|||
Zfish   436 NVCFTVKPGQLLAVIGPVGAGKSSLLSTVLGELPAEKGVIKVKGELTYASQQPWVFPGTIRSNIL 500

  Fly   731 FGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGINLSGGQKQRISLARAVYSDADLYLLD 795
            ||:....:||.:|:.||||:.|:::|..||||.||::|..||||||.|::||||||.|||:||||
Zfish   501 FGKELQPQRYERVLRACALKRDMELLPDGDLTVIGDRGATLSGGQKARVNLARAVYQDADIYLLD 565

  Fly   796 DPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTFLPQVDSIYVIKMGEISESGTFDQLVK 860
            ||||||||.|.:|:||:.:  .|||..|.|:||||.:.:|...:.|.|:|.|.:...|::.:|.:
Zfish   566 DPLSAVDAEVSRHLFEQCV--CGILKDKPRILVTHQLQYLKAANQILVLKEGHMVARGSYSELQQ 628

  Fly   861 NKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVPELLGTVEKAIKLARTESLSDSISVTSAD 925
            :...|...:      ..:||||..      |...:.|.                           
Zfish   629 SGLDFTSLL------KKDEEEESG------SEKGEAPR--------------------------- 654

  Fly   926 SLMGGGGSLRRRTKRQD---SHDSVASAASLK-KKQEVEGKLIET---EKSQTGGVEFAVY-KHY 982
                   |.|.||..|:   ||.|  |..|:| ...::..:.:.|   |....|.:...:| |::
Zfish   655 -------SPRSRTVSQNSVRSHSS--SVLSVKDDSDQLPAEPVHTMAEELRSEGNIGIRMYWKYF 710

  Fly   983 IKSVGIFLSVATLVLNFVFQAFQIGSNLWLTQWANDQ---------------NVANDTGLRDM-- 1030
            .....:.:.|..|:||.:.|.|.|..:.||:.||.:|               :..|.|...|:  
Zfish   711 RAGANVVMLVLLLLLNLLAQTFYILQDWWLSYWATEQEKLDHNTNNTNTNNTSAGNTTQQLDLNF 775

  Fly  1031 YLGVY----GA---FGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITPIGR 1088
            |||:|    ||   |||.:.::.:.|:|       .:|:.:||.:...|:|..| |||||.||||
Zfish   776 YLGIYAGLTGATIVFGFMRCLIMFNALV-------SSAEMLHNRMFNSILRTPV-RFFDINPIGR 832

  Fly  1089 LLNSFSGDMDVVDEELPATMDSFMTFIFMVLATIVVISLSTPIFLAVIVPIAFLYYFAQRFYVAT 1153
            :||.||.|:..:|..||.|...|:.....::..|.|.|...|..|..::|:...:.|.:|:::.|
Zfish   833 ILNRFSKDIGHLDSLLPWTFVDFIQVFLQIVGVIAVASSVIPWILIPVLPLLICFLFLRRYFLRT 897

  Fly  1154 SRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANRWLAI 1218
            ||.:.|:||.:|||::||.|.::.|..||||:...:||.:..||..|.:....:..:..:||.|:
Zfish   898 SRDVKRIESTTRSPVFSHLSSSLQGLWTIRAFKAEERFQQTFDAHQDLHSEAWFLFLTTSRWFAV 962

  Fly  1219 RLEMVGNLIILFASLFAVLGGQT-NPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKE 1282
            ||:.:.::.:...:...:|...| |.|.|||::|||:.:.....|.||.|:::|..:.||||:.|
Zfish   963 RLDGMCSVFVTITAFGCLLLKDTMNAGDVGLALSYAVTLMGMFQWGVRQSAEVENMMTSVERVVE 1027

  Fly  1283 YGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKVGIVGRTG 1347
            |.|.:.|||||.:  |....:||..|.:.|......|.....:||:.:|...:..||||||||||
Zfish  1028 YTELESEAPWETQ--KRPSPDWPNRGLITFDRVNFSYSSDGPVVLKNISAMFRPREKVGIVGRTG 1090

  Fly  1348 AGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINLDPFEIKT 1412
            ||||||..||||:.|.. |:|.:|||..:.:|||.||.:::|||||||||:|::|.|||||...:
Zfish  1091 AGKSSLISALFRLSEPE-GKILVDGVLTSEIGLHDLRQKMSIIPQDPVLFTGTMRKNLDPFNQHS 1154

  Fly  1413 DDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVLVLDEATAAV 1477
            |.::|||||...||:.|:.|...|..|:||.|.|.|||||||||||||:|||.:||::|||||.|
Zfish  1155 DHDLWKALEEVQLKAAVEELPGKLETELAESGSNFSVGQRQLVCLARAILRKNRVLIIDEATANV 1219

  Fly  1478 DLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLDNPKSAFYSM 1542
            |..||:|||||||.:||||||||||||||||:|||:::|||.|:|.|:.:|..||.|....||.|
Zfish  1220 DPRTDELIQKTIRDKFKECTVLTIAHRLNTIIDSDRILVLDAGRIHEYDAPHVLLQNQSGIFYKM 1284

  Fly  1543 AK 1544
            .:
Zfish  1285 VQ 1286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 511/1367 (37%)
ABC_membrane 338..601 CDD:279056 93/267 (35%)
ABCC_MRP_domain1 649..848 CDD:213217 98/203 (48%)
ABC_membrane 988..1260 CDD:279056 96/296 (32%)
ABCC_MRP_domain2 1308..1528 CDD:213211 128/219 (58%)
abcc4NP_001007039.2 SunT 11..1289 CDD:331423 511/1367 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586018
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.660

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