DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and mrp-8

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_499598.2 Gene:mrp-8 / 190710 WormBaseID:WBGene00003414 Length:1461 Species:Caenorhabditis elegans


Alignment Length:1538 Identity:565/1538 - (36%)
Similarity:842/1538 - (54%) Gaps:169/1538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ALVNLGLLVITALDLIMALVKKGGDSEL--PLYDLDVWGPII-------KFATFLLLFI-----F 127
            |:..:.||....|..:...:.:..:.:|  |.|   .|..:|       ..|.|..|:.     |
 Worm    23 AIAAIPLLAFWLLIPVFVRIIRDNEPKLRAPKY---FWAHLILQVLLLVDNAVFGALYFNQTDHF 84

  Fly   128 IPLNRKYGVQTTGCQFIFWFLLTVLSIPRCRTEVRLDAERQKILNSQQPSEQDFSWEEYQFVSFF 192
            :||.|               .|.|||...|.....|.::|   |:|..||          |...|
 Worm    85 LPLLR---------------FLQVLSYANCCIWFSLLSKR---LHSIHPS----------FCLIF 121

  Fly   193 IFFTFTSIMLIL-----NCFADGMPRQ--------------TKYQRGENE-----IPELSASFLS 233
            :.......:.:|     :.|..|:..:              || :.||:|     .||..:||||
 Worm   122 LILLVLKAVQVLVLVFESTFDAGVTAEFVLLMAETALLASSTK-RLGEDEQKIEQTPEEKSSFLS 185

  Fly   234 RITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRKNYKNKARVEPKAQFS 298
            :|.:.|.:.:...|.:.||..:.|                 |:.|:|....:          .::
 Worm   186 KIFFCWLNPLIRAGAKQPLTNESL-----------------HNLNENATSEW----------LYT 223

  Fly   299 NGNVTFENPHGEKNGRKKGMASIMPPIYKSFGGVFLFGALMKLFTDTLTFAQPQVLSLIISFVEA 363
            .....|:.   ||.|||.|..||:.|..:......:...|.:|..|.:.:..|.:|..:|.:|..
 Worm   224 RWRAEFDK---EKAGRKSGETSIVWPFIRIQRATIITLTLARLTADIVHYLNPILLKQLIDYVSL 285

  Fly   364 QDAEPEWKGILYAVLLFVLAAAQTFILGQYFHRMFIVGLRIRTALINAIYRKALRISNSTKKEST 428
            .| :|...||..|.::|..:..::.:.......|....:..:|.|.|||..|.||:|.|.:...|
 Worm   286 HD-QPLSFGIAIACIMFSCSTTRSLLQNYQIAGMCRQAVYYQTVLSNAILHKILRLSPSARSNRT 349

  Fly   429 VGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYFLWQQLGPSVLAGLAVMIILIPVNGVIA 493
            .|||:|..|||.:..:....||..:||.|.|:.||:..|...||.:.:||:.:||:.||:|...:
 Worm   350 AGEILNHAAVDIEIIVHSVPYLQNMWSVPFQVTLAMTMLAITLGWAAMAGVCIMILFIPLNLCTS 414

  Fly   494 SRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEIATLRSTAYLNAGT 558
            ..||..|.:|||.||||.||.||:|:||||:||||||.|||.|:..:|.||:..||:...|:...
 Worm   415 RFIKLSQQKQMKIKDERTKLSNEMLNGIKVVKLYAWEESFEDQINRLRAKEVKMLRNVCILSRIV 479

  Fly   559 SFLWSCAPFLVSLVTFATYVLTS-EANQLSVEKVLVSIALFDLMKLPLTILPMLSVDIAETQVSV 622
            ....:.:||||::.:|..|||.| :.|.|:.....|::.:|:.::.|:.::..|...:.:.:||.
 Worm   480 DVANAASPFLVAIGSFTCYVLWSPDENGLTPSVAFVALTIFNQLRQPMRMVANLINTLVQARVSN 544

  Fly   623 NRINKFLNSEELDPNSVLHDSSKPHPMSIENGEFSW---GDEITLRNINIEVKKGSLVALVGTVG 684
            .|:.:|||.||::..:   :.:..:.:..:|...:|   .:...|::::..:|.|.|:|:||:||
 Worm   545 KRLRQFLNDEEMERKT---EVALGNAIVFKNASLNWKGPQNPPVLKDLSATIKPGQLIAIVGSVG 606

  Fly   685 SGKSSVVQAFLGEMEKLAGVVNTVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACAL 749
            .||||::.|.|.||..|.|.|...|.:|||||.:||.|.|:::|||||.......|::|:.:|.|
 Worm   607 GGKSSLLSAVLDEMVLLDGRVKVGGSIAYVPQHSWIFNKTIKENILFGNELSNYFYDQVVGSCQL 671

  Fly   750 RADIDILSAGDLTEIGEKGINLSGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVI 814
            :.|......|:.|.:||.||.||||||.|||||||||.|.|:|||||||||||||||:.:|::||
 Worm   672 KTDFRHFQQGENTMVGENGITLSGGQKARISLARAVYQDKDIYLLDDPLSAVDAHVGRALFDKVI 736

  Fly   815 GPKGILARKSRVLVTHGVTFLPQVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEE 879
            ||.|:|..|:||||||.:.:...||:||||:.|:|.:.|:|:.:....|.|.. :....:..:|:
 Worm   737 GPDGLLRSKTRVLVTHNLQYTKYVDTIYVIEDGQIVQHGSFEDIAYVDGPFGR-LWSECENSDED 800

  Fly   880 EEELNQIKRQISSTADVPEL----LGTVEKAIKLARTESLSDSISVTSADSLMGGGGSLRRRTKR 940
            ..:......:.|.|..||.|    .|.:||:.::.||                            
 Worm   801 VADEEAESSEASVTPPVPVLENGDNGAIEKSSQIDRT---------------------------- 837

  Fly   941 QDSHDSVASAASLKKKQEVEGKLIETEKSQTGGVEFAVYKHYIKSVGIFLSVATLVLNFVFQAFQ 1005
             :||.|..|..|.:|.|:||..:   |..|.|.|:.:||:.|||::|||.|.|.|:.........
 Worm   838 -NSHFSEKSRKSEEKPQKVEKNV---ENVQLGRVKKSVYQLYIKTMGIFNSSAFLIFFIAHFTVM 898

  Fly  1006 IGSNLWLTQWANDQNVANDTGLRDM-YLG----------------VYGAFGFGQGVLAYFAVVIV 1053
            |..:|||:.|:|:........|..: ||.                ||..||..:.:|...|..::
 Worm   899 IMRSLWLSDWSNENAAIKKATLSSVDYLNSTSSVDGPVSVETRLIVYAGFGGLEMLLLALAFTVL 963

  Fly  1054 YLGGFQAAKTIHNELLAVIIRGSVCRFFDITPIGRLLNSFSGDMDVVDEELPATMDSFMTFIFMV 1118
            .:|..:|:..:|:.|:..::...: .|||.||.||::|..|.|:||:| :|...:......:...
 Worm   964 TIGSLRASYGLHSPLIHALLVAPI-SFFDTTPTGRIINRLSRDLDVID-KLQDNIRMCTQTLLNA 1026

  Fly  1119 LATIVVISLSTPIFLAVIVPIAFLYYFAQRFYVATSRQLMRLESVSRSPIYSHFSETVTGASTIR 1183
            ...:|:||:||||||....|:..:|||...:|:.|||||.||||.:||||.|..:|::.|||:||
 Worm  1027 CMILVLISISTPIFLVCAAPLILIYYFVMIYYIPTSRQLKRLESANRSPILSTIAESIHGASSIR 1091

  Fly  1184 AYNVGDRFIEESDAKVDKNQVCKYPSVIANRWLAIRLEMVGNLIILFASLFAVLG----GQTNPG 1244
            |::..:|........|||...|:|.|.::|||||.|||::||..:|||||.|.|.    |.| ||
 Worm  1092 AFDKTERTTTALSTNVDKFAQCRYLSHMSNRWLATRLELLGNTCVLFASLSATLSTKYFGLT-PG 1155

  Fly  1245 LVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKEYGETKQEAPWELEQDKNKPKNWPQEGR 1309
            :.||||||||.:|:.||..||..|:||:|||||||:.||.:.:.||||.:|:.....:.||.:|:
 Worm  1156 MAGLSVSYALTITEVLNICVRSVSEIESNIVSVERVNEYQKLEPEAPWRIEKSLENEEKWPVKGK 1220

  Fly  1310 VEFQNFQVRYREGLDLVLRGVSFNIQGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVD 1374
            :|...|.:|||:.|.|||:.:...|:|||::|::||||:||||||:||:|:||...|.|.||.|:
 Worm  1221 IELDGFSMRYRKNLPLVLKNIDLKIEGGERIGVIGRTGSGKSSLTMALYRMIEGESGTIKIDDVE 1285

  Fly  1375 IASMGLHMLRSRLTIIPQDPVLFSGSLRINLDPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHE 1439
            |.::|||.|||:|.||||:||:|||:||.|||||...:||:||..||:..||.|.:.....|:..
 Worm  1286 IDTIGLHQLRSKLIIIPQEPVVFSGTLRFNLDPFNQYSDDQIWNCLEICQLKQFAQEDDKTLDRY 1350

  Fly  1440 IAEGGENLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHR 1504
            |||||:|:|||:|||:||.|||||..::::||||||:||..||.::|:.||..|.:.|.::||||
 Worm  1351 IAEGGKNMSVGERQLLCLCRALLRGARIVILDEATASVDTVTDGIVQRAIRQHFPQSTTISIAHR 1415

  Fly  1505 LNTILDSDKVIVLDKGQIIEFASPTELLDNPKSAFYSMAKDAN 1547
            |:||:|||:::|||.|::.||.:|:.||.||.|.:..:..:.|
 Worm  1416 LDTIVDSDRIVVLDAGRVAEFDTPSNLLLNPDSLYSQLLNEKN 1458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 565/1538 (37%)
ABC_membrane 338..601 CDD:279056 98/263 (37%)
ABCC_MRP_domain1 649..848 CDD:213217 100/201 (50%)
ABC_membrane 988..1260 CDD:279056 110/292 (38%)
ABCC_MRP_domain2 1308..1528 CDD:213211 119/219 (54%)
mrp-8NP_499598.2 CFTR_protein 173..1459 CDD:273530 528/1356 (39%)
ABC_membrane 259..527 CDD:294371 98/268 (37%)
ABCC_MRP_domain1 568..770 CDD:213217 100/201 (50%)
ABC_membrane 887..1168 CDD:294371 105/283 (37%)
ABCC_MRP_domain2 1219..1439 CDD:213211 119/219 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D27645at33208
OrthoFinder 1 1.000 - - FOG0000087
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - O PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X177
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.790

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