DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and abcc4

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_002939329.2 Gene:abcc4 / 100491006 XenbaseID:XB-GENE-957302 Length:1324 Species:Xenopus tropicalis


Alignment Length:1368 Identity:510/1368 - (37%)
Similarity:793/1368 - (57%) Gaps:136/1368 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 RGENEIPELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRK 283
            :|....|...|:|.|:|.:.|.:.:.:.|::..|||.|::::.|:|:..::......:|.:.::|
 Frog     6 KGSKANPSQHANFCSKIFFWWLNPLFILGHKRKLEEDDMYEVLPEDASRKLGEELQWYWEKELQK 70

  Fly   284 NYKNKARVEPKAQFSNGNVTFENPHGEKNGRKKGMA-SIMPPIYKSFG--GVFLFGALMKLFTDT 345
                                     .:..|||..:. :|:...:|:|.  |:|.|      |.::
 Frog    71 -------------------------AQNEGRKPRLTKAIIRCHWKTFSVLGLFTF------FEES 104

  Fly   346 LTFAQPQVLSLIISFVEAQDAEPEWKGILYAVL--LFVLAAAQ---TFILGQ----YFHRMFIVG 401
            :...||..|..:||:.|..||...      |||  .::.|||.   |.||..    ||:.:...|
 Frog   105 IRVVQPIFLGNVISYFERYDANDS------AVLANAYINAAALSACTLILAVVHHIYFYHLLRAG 163

  Fly   402 LRIRTALINAIYRKALRISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYF 466
            :::|.|:.:.|||||||:||:...::|.|:||||::.|..:|.::|.:|:.:|:.|||.......
 Frog   164 MKLRVAMCHMIYRKALRLSNTAMGKTTTGQIVNLLSNDVNKFDQVTIFLHFLWAGPLQAIAVTVL 228

  Fly   467 LWQQLGPSVLAGLAVMIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEP 531
            ||.::|||.|||:||:|||:|:...:.....:.:.:...:.|.|::.||||:||::::|:||||.
 Frog   229 LWMEIGPSCLAGMAVLIILMPLQLCLGKFFTSLRGKTAAFTDTRIRTMNEVISGMRIIKMYAWEQ 293

  Fly   532 SFEKQVLDIRDKEIATLRSTAYLNAGTSFLWSCAPFLVSLVTFATYVLTSEANQLSVEKVLVSIA 596
            ||.:.|.:||.|||..:..::||.|.....:..|..::..|||.||||.  .|.:|..:|.|:::
 Frog   294 SFTELVNNIRKKEINKVLRSSYLRALNLASFFVASKIILFVTFTTYVLL--GNVISASRVFVAVS 356

  Fly   597 LFDLMKLPLTILPMLSVDIA-ETQVSVNRINKFLNSEEL-DPNSVLHDSSKPHPM-SIENGEFSW 658
            |:..::|.:|:....:|:.| |.:||:.||..||..:|: .|...|.:.::.:.: .|::....|
 Frog   357 LYSAVRLTVTLFFPSAVERASEAKVSIRRIKNFLLLDEIFKPALELPEENEENLLVQIQDVTCYW 421

  Fly   659 GDEI---TLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGVVNTVGKLAYVPQQAWI 720
            ...:   ||:||:..|:.|.|:|::|.||:||||::.|.|||:.|..|.|:..|::|||.||.|:
 Frog   422 DKTLEIPTLQNISCSVRPGELLAVIGPVGAGKSSLLSAVLGELPKDKGFVDIRGRIAYVSQQPWV 486

  Fly   721 QNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGINLSGGQKQRISLARAV 785
            .:.|||.|||||:.|.:::|:||:..|||:.|:..|..||||.||::|:.||||||.|::|||||
 Frog   487 FSGTVRSNILFGKEYVQEKYDKVLRVCALKKDMLQLDDGDLTIIGDRGVTLSGGQKARVNLARAV 551

  Fly   786 YSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTFLPQVDSIYVIKMGEIS 850
            |.|||:||||||||||||.||:|:||:.|..  .|.:|..:||||.:.:|.....|.::|.|.:.
 Frog   552 YQDADIYLLDDPLSAVDAEVGRHLFEKCICQ--ALRKKLCILVTHQLQYLSAAKQILILKEGRMV 614

  Fly   851 ESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVPELLGTVEKAIKLARTESL 915
            ..|||.:|:::...||..:      .:||||:....:.|:                ||.:|..:.
 Frog   615 GKGTFQELLQSGIDFASLL------KSEEEEQSQSQEGQL----------------IKSSRNRTF 657

  Fly   916 SDSISVTSADSLMGGGGSLRRRTKRQDSHDSVASAASLKKKQEVEGKLIETEKSQTGGVEFAVYK 980
            |.| ||.|.||.:        ::.::.:.|::|:...|        ..|..|....|.|.|.|||
 Frog   658 SQS-SVWSQDSTV--------QSHKEGATDNLAAEPVL--------TAIPEESRSEGTVGFKVYK 705

  Fly   981 HYIKSVGIFLSV-ATLVLNFVFQAFQIGSNLWLTQWANDQ---NV---ANDTGLR------DMYL 1032
            .|..|...:|.: ..|:||.:.|...:..:.||:.|||:|   |:   .|.||.:      .:||
 Frog   706 KYFTSGSSYLMLFVVLLLNILSQVTYVLQDWWLSYWANEQGKLNITSGTNSTGSKTEQLDLTLYL 770

  Fly  1033 GVYGA-------FGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITPIGRLL 1090
            |||..       ||..:.:|.:..:|.       ||:.:||::...:::..|. |||..||||:|
 Frog   771 GVYAGLTVATIIFGVLRCLLVFHVLVC-------AAQALHNQMFQSLLKAPVL-FFDRNPIGRIL 827

  Fly  1091 NSFSGDMDVVDEELPATMDSFMTFIFMVLATIVVISLSTPIFLAVIVPIAFLYYFAQRFYVATSR 1155
            |.||.|:..:|:.:|.|...||..:..:|..|.|.....|..|..::|:..::||.:|:::.|||
 Frog   828 NRFSKDIGHLDDLMPFTFLDFMQVLLQILGVIAVAVAVIPWILIPLLPLVIVFYFLRRYFLDTSR 892

  Fly  1156 QLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANRWLAIRL 1220
            .:.||||.:|||::||.|.::.|..||||:....||.:..||:.|.:....:..:..:||||:||
 Frog   893 DIKRLESTTRSPVFSHLSSSLQGLWTIRAFKAEKRFQDLFDAQQDLHSEAWFLFLTTSRWLAVRL 957

  Fly  1221 EMVGNLIIL---FASLFAVLGGQTNPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKE 1282
            :.:..:.::   |.|:  :|....:.|.|||::||.:.:..:..|.||.|:::|..::|.||:.|
 Frog   958 DAICAVFVIAIAFGSI--ILAENLDAGQVGLALSYGMTIMGSFQWGVRQSAEVENLMISAERVME 1020

  Fly  1283 YGETKQEAPWELEQDKN-KPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKVGIVGRT 1346
            |.:.::||.||   .|| .|.:||.:|.:.|:|....|.....:|||.::..|:..|||||||||
 Frog  1021 YTQLEKEAEWE---SKNPPPADWPNKGMITFENVNFSYSLDGPVVLRHLNALIRPKEKVGIVGRT 1082

  Fly  1347 GAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINLDPFEIK 1411
            |||||||..||||:.|.. |:|.||....:.:|||.||.:::||||:||||:|::|.|||||:..
 Frog  1083 GAGKSSLIAALFRLAEPE-GKIWIDKYLTSKLGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFDEH 1146

  Fly  1412 TDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVLVLDEATAA 1476
            .|:|:|..||...||..|:.|...:..:::|.|.|.|||||||||||||:||:.::|::|||||.
 Frog  1147 ADEELWDVLEEVQLKEAVEELPGKIETQLSESGSNFSVGQRQLVCLARAILRRNRILIIDEATAN 1211

  Fly  1477 VDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLDNPKSAFYS 1541
            ||..||:|||||||.:|.||||||||||||||:||||::|||.|::.|:..|..||.|.:|.||.
 Frog  1212 VDPRTDELIQKTIREKFAECTVLTIAHRLNTIIDSDKIMVLDAGRVKEYDEPYLLLQNKESLFYK 1276

  Fly  1542 MAK 1544
            |.:
 Frog  1277 MVQ 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 510/1368 (37%)
ABC_membrane 338..601 CDD:279056 97/271 (36%)
ABCC_MRP_domain1 649..848 CDD:213217 98/202 (49%)
ABC_membrane 988..1260 CDD:279056 93/294 (32%)
ABCC_MRP_domain2 1308..1528 CDD:213211 121/219 (55%)
abcc4XP_002939329.2 PLN03130 2..1289 CDD:215595 510/1368 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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