DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and cftr

DIOPT Version :10

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_031754831.1 Gene:cftr / 100486085 XenbaseID:XB-GENE-853972 Length:1485 Species:Xenopus tropicalis


Alignment Length:1501 Identity:400/1501 - (26%)
Similarity:698/1501 - (46%) Gaps:251/1501 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRKNYKNKA 289
            |...||..|:|.:.|...:..||||..||..|::.:.|.||...:.......|::.|..:.||  
 Frog     5 PLEKASIFSQIFFSWTKPILWKGYRQRLELSDIYQIHPGDSADNLSERLEREWDREVATSKKN-- 67

  Fly   290 RVEPKAQFSNGNVTFENPHGEKNGRKKGMASIMPPIYKSFGGVFLFGALMKLFTDTLTFAQPQVL 354
               ||                          ::..:.:.|...|||..::....:.....||.:|
 Frog    68 ---PK--------------------------LINALKRCFFWKFLFYGILLYLGEVTKAVQPLLL 103

  Fly   355 SLIISFVEAQDAEPEWKGILY--AVLLFVLAAAQTFILGQYFHRMFIVGLRIRTALINAIYRKAL 417
            ..||:..: :|.|.| :.|.|  |:.|.:|...:..:|......:..:|:::|.|:.:.||:|.|
 Frog   104 GRIIASYD-RDNEHE-RSIAYYLAIGLCLLFVVRMLLLHPAIFGLHHIGMQMRIAMFSLIYKKTL 166

  Fly   418 RISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYFLWQQLGPSVLAGLAVM 482
            ::|:....:.:.|::|:|::.:..:|.|.....:.:|.||||:.|.:..||..|..|...||..:
 Frog   167 KLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVLLLMGLLWDLLQASAFCGLGFL 231

  Fly   483 IILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEIAT 547
            |||......:...:..|:.::....:||:.:.:|::..|:.:|.|.||.:.||.:..||:.|:..
 Frog   232 IILALFQAWLGRMMMKYRDKRAGKINERLVITSEIIENIQSVKAYCWESAMEKIIETIRETELKL 296

  Fly   548 LRSTAYLNAGTSFLWSCAPFLVSLVTFATYVLTSEANQLSVEKVLVSIALFDLMKLPLT-ILPML 611
            .|..||:....|..:..:.|.|..:....::|   .:.:|:.|:..:|:...::::.:| ..|..
 Frog   297 TRKAAYVRYFNSSAFFFSGFFVVFLCIVPHLL---LDGISLRKIFTTISFSIVLRMAVTRQFPWA 358

  Fly   612 SVDIAETQVSVNRINKFLNSEE---LDPNSVLHDSSKPHPMSIENGEFSWGDEI----------- 662
            .....::...:|:|.:||..||   |:.|....:      :::||...||.:.|           
 Frog   359 VQTWYDSLGVINKIQEFLQKEEYKSLEYNLTTTE------VAMENVSASWDEGIGEFFEKAKQEV 417

  Fly   663 -----------------------TLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGV 704
                                   .|||||.:::||.|:|:.|:.|:||:|::...:||:|..||.
 Frog   418 NGGNISNEDPSPFFSNFSLHVAPVLRNINFKIEKGQLLAIAGSTGAGKTSLLMMIMGELEPSAGK 482

  Fly   705 VNTVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGI 769
            :...|::::.||.:||...|:::||:||.:||:.||..||.||.|..||......|.|.:||.||
 Frog   483 IKHSGRISFSPQVSWIMPGTIKENIIFGVSYDQYRYLSVIKACQLEEDISKFPEKDNTVLGEGGI 547

  Fly   770 NLSGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTF 834
            .|||||:.|||||||||.||||||:|.|.|.:|....|.|||..:..  ::|.|:|:|||..|..
 Frog   548 TLSGGQRARISLARAVYKDADLYLMDSPFSYLDLFTEKEIFESCVCK--LMANKTRILVTSKVEQ 610

  Fly   835 LPQVDSIYVIKMGEISESGTFDQL----------------------------------------- 858
            |.:.|.:.::..|.....|||.:|                                         
 Frog   611 LKKADKVLILHEGSCYFYGTFSELQDQRPEFSSHLTGFDHFNAERRNSIITETLRRCSIDSDPTA 675

  Fly   859 ----VKNKG--AFADF-------------------IIQHLQ---EGNEEEE-ELNQIKRQISSTA 894
                ||||.  ..|||                   |:|..|   .|.|||: ..||.:|::|.  
 Frog   676 VRNEVKNKSFKQVADFSEKRKNSVINPRKSSRKFSIMQKSQPQMSGIEEEDIPPNQGERKLSL-- 738

  Fly   895 DVPELLGTVEKAIKLARTESLSDS-----------ISVTSADSLMGGGGSLRRRT---------- 938
             |||   :.:....|.|:..|:..           :::.:..|:..|..:...|.          
 Frog   739 -VPE---SEQGEASLPRSNVLNTGPTFQGRRRQSVLNLMTRTSVSQGSNAFATRNTSVRKMSVGS 799

  Fly   939 -----------KRQDSHDSVASAASLKKKQEVEGKLIETEKSQTGGVEFAVYKHYIKSVG--IFL 990
                       .|:.|.||:...:....:::::...::...|.:....:..|..::.:..  ||:
 Frog   800 FSNSSFEVDIYNRRLSQDSILEVSEEINEEDLKECFLDDTDSPSPTTTWNTYIRFLTAHKNFIFI 864

  Fly   991 SVATLVLNFVFQAFQIGSNLWL-------TQWANDQNVANDTGLRD-------------MYLGVY 1035
            .|..:|: |:.:.....:.||:       :...:::|::..:.:..             :|:||.
 Frog   865 LVFCIVI-FLAEVIASSAGLWIIKRNAPVSNMTSNENISEASDILSVIVTHTSFYYVFYIYVGVA 928

  Fly  1036 G---AFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITPIGRLLNSFSGDM 1097
            .   |.|..:|:....:::.|       ::.:|.::|..|:...:.. |:....||:||.||.|.
 Frog   929 DSLLALGIFRGLPLVHSLISV-------SRVLHKKMLHSILHAPMST-FNTMRAGRILNRFSKDT 985

  Fly  1098 DVVDEELPATMDSFMTFIFMVLATIVVISLSTP-IFLAVIVPIAFLYYFAQRFYVATSRQLMRLE 1161
            .::|:.||.::..|...:.:|:..|.|:||..| ||||. ||:...:...:.:::.||:||.:||
 Frog   986 AILDDILPLSIFDFTQLVLIVIGAITVVSLLEPYIFLAT-VPVIAAFILLRSYFLHTSQQLKQLE 1049

  Fly  1162 SVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANRWLAIRLEMVGNL 1226
            |.:||||::|...::.|..|:||:.....|.......::.:....:..:...||..:.:||:..:
 Frog  1050 SEARSPIFAHLITSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMTIEMIFVI 1114

  Fly  1227 IILFASLFAVLGGQTNPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKEYGETKQEAP 1291
            ..:..|..::.........||:.::.|:.:..||.|.|..|.|:::.:.||.||..:.:..:|  
 Frog  1115 FFIAVSFISIATSGAGEEKVGIVLTLAMNIMNTLQWAVNASIDVDSLMRSVSRIFRFIDMPRE-- 1177

  Fly  1292 WELEQDKN------------------KPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGE 1338
             ||..|.|                  |.:.||..|::..:|...:|::|...||..:||::..|:
 Frog  1178 -ELIHDNNHKDDQLSEVLIYENDYIKKNQVWPSGGQMTVKNLSAKYKDGGHTVLENISFSLNPGQ 1241

  Fly  1339 KVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRI 1403
            :||::||||:|||:|..|..|::...|. |.||||...::.|...|....::||...:|||::|.
 Frog  1242 RVGLLGRTGSGKSTLLSAFLRLLSTQGD-IQIDGVSWQTIPLQKWRKAFGVVPQKVFIFSGTIRK 1305

  Fly  1404 NLDPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVL 1468
            ||||:...:|:|:.|..|...|||.:......|:..:.:||..||.|.:|||||||::|.|.|:|
 Frog  1306 NLDPYGKWSDEELLKVTEEVGLKSIIDQFPGQLDFVLLDGGCVLSHGHKQLVCLARSVLSKAKIL 1370

  Fly  1469 VLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLD 1533
            :|||.:|.:|..|..:|:||::..|..|||:...|||..:|:....:|::...:.::.|..:|: 
 Frog  1371 LLDEPSAHLDPITFQIIRKTLKHAFANCTVILSEHRLEAMLECQHFLVIEDNTVRQYDSIQKLM- 1434

  Fly  1534 NPKSAF 1539
            |.||.|
 Frog  1435 NEKSFF 1440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 400/1501 (27%)
cftrXP_031754831.1 CFTR_protein 1..1472 CDD:273530 400/1501 (27%)

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