DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and abcc3

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001107301.1 Gene:abcc3 / 100135090 XenbaseID:XB-GENE-1003737 Length:1531 Species:Xenopus tropicalis


Alignment Length:1573 Identity:790/1573 - (50%)
Similarity:1062/1573 - (67%) Gaps:76/1573 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MDRFC-----GSTFWNATETWYTNDPDFTPCFEQTALVWTPCAFYWAFVIFDFYYLKASLDRNIP 68
            |:.||     ||.||::..|.||::||.||||:.|.|.|.||.:.|..:.|...|||.:....|.
 Frog     1 METFCGSGDLGSQFWDSNLTLYTDNPDVTPCFQNTVLAWIPCVYLWVALPFYLLYLKYNRRGYIV 65

  Fly    69 WNKLNVSKALVNLGLLVITALDLIMA---LVKKGGDSELPLYDLDVWGPIIKFATFLLLFIFIPL 130
            .:.|:.:|.:..:.|..:...||..:   ||:  ..|..|:|.:.   |:|...|.:...:....
 Frog    66 LSMLSKAKTVFGVLLWCVCWADLFYSFHGLVQ--NQSPPPVYFVT---PLILGITMITATVLAQY 125

  Fly   131 NRKYGVQTTGCQFIFWFLLTVLSIPRCRTEVRLDAERQKILNSQQPSEQDFSWEEYQFVSFFIFF 195
            .|..|||::|...|||||.||.:|...|::|...|.:.::.            ::::|.:||::|
 Frog   126 ERLRGVQSSGVLIIFWFLATVCAIIPFRSKVMASARQGQVT------------DKFRFTTFFLYF 178

  Fly   196 TFTSIMLILNCFADGMPRQTKYQRGENEIPELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDL 260
            :...|.|:|:||.:..|..:..:...|..||..|.||||:|:.||.|||:.||:.|||:||||.|
 Frog   179 SLLVIELLLSCFKEARPFFSPVRDEINPCPESDAGFLSRLTFWWFTKMAILGYKRPLEDKDLWSL 243

  Fly   261 RPQDSCSEVMPIFAHHWNQNVRKNYKNKARVEPKAQFSNGNVTFENPHGEK---------NGRKK 316
            ...|:.:.|:......|    .|...|.|:::  ..:|.......|...||         :.:|.
 Frog   244 NEDDTSNVVVTNLIKEW----EKEKSNLAQMQ--VSYSKKPEAVLNHTDEKAYESDVLIVDNKKP 302

  Fly   317 GMASIMPPIYKSFGGVFLFGALMKLFTDTLTFAQPQVLSLIISFVEAQDAEPEWKGILYAVLLFV 381
            ...|.:..:.::||..||.|:..|||.|.|:|..||:||::|:|::.:|| |.|.|...|||:|:
 Frog   303 KEPSFLKVLLRTFGPYFLIGSFFKLFQDLLSFVNPQLLSILITFIKNKDA-PSWWGFCIAVLMFL 366

  Fly   382 LAAAQTFILGQYFHRMFIVGLRIRTALINAIYRKALRISNSTKKESTVGEIVNLMAVDAQRFMEL 446
            .:..||.||.|:|...|:.|:|:|:|:...||||:|.|:||.|:.|||||:||||:||||||.:|
 Frog   367 TSLVQTLILHQHFQYCFVTGMRLRSAITGIIYRKSLVITNSAKRSSTVGEVVNLMSVDAQRFQDL 431

  Fly   447 TTYLNMIWSAPLQIGLALYFLWQQLGPSVLAGLAVMIILIPVNGVIASRIKTYQIRQMKYKDERV 511
            ||:|||:|||||||.||||||||.||||||||:|||::|||:|..||.:.:.:|:.||:|||.|:
 Frog   432 TTFLNMLWSAPLQICLALYFLWQALGPSVLAGVAVMVLLIPINAFIAMKTRAFQVEQMQYKDSRI 496

  Fly   512 KLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEIATLRSTAYLNAGTSFLWSCAPFLVSLVTFAT 576
            |||||:|:||||||||||||||.::||:||:||:..|:..|||||.::|.|:.|||||:|.|||.
 Frog   497 KLMNEILNGIKVLKLYAWEPSFAQKVLEIRNKELNILKKAAYLNALSTFAWTSAPFLVALTTFAV 561

  Fly   577 YVLTSEANQLSVEKVLVSIALFDLMKLPLTILPMLSVDIAETQVSVNRINKFLNSEELDPNSVLH 641
            ||...|.|.|..||..||::||::::.||.:||.:..::|:..||:.||..||.::|||.|:|..
 Frog   562 YVTVDEKNILDAEKAFVSLSLFNILRFPLNMLPQVISNLAQASVSIKRIQNFLANDELDLNAVTK 626

  Fly   642 DSSKP-HPMSIENGEFSW---GDEITLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLA 702
            |.:.| :.:::.||.|||   |..| |:|||:.|..|||||:||.||.||||:|.|.||||||..
 Frog   627 DKTLPGNAITVHNGTFSWAKNGGAI-LQNINLLVPSGSLVAVVGQVGCGKSSLVSALLGEMEKEE 690

  Fly   703 GVVNTVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEK 767
            |.|:..|.:|||||||||||.|::||||||:..:.|.|.||::||||..|:::|..||.||||||
 Frog   691 GEVSVRGSVAYVPQQAWIQNCTLKDNILFGRAANEKNYKKVLEACALVTDLEVLPGGDQTEIGEK 755

  Fly   768 GINLSGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGV 832
            |||||||||||:||||||:|:||:||||||||||||||.||||:.||||.|:|..|:|||||||:
 Frog   756 GINLSGGQKQRVSLARAVFSNADVYLLDDPLSAVDAHVAKHIFDNVIGPDGLLRGKTRVLVTHGI 820

  Fly   833 TFLPQVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVP 897
            :||||||.|.|:..|.::|.|::.:|:|..|||::|:..:..:...|||::        :..|..
 Frog   821 SFLPQVDHIVVLVDGRVTEMGSYQELLKQNGAFSEFLRNYAFDDEVEEEDI--------TIPDEE 877

  Fly   898 ELL---GTVEKAIKLARTESLSD--------SISVTSADSLMGGGGSLRRRTKRQDSHDSVASAA 951
            |:|   .|:.....||..|.:::        .||:.|.........:.||.|:::.|.:.||   
 Frog   878 EVLLAEETLSTHTDLADNEPVANEARKKFIRQISILSDGEPSHAMSTRRRFTEKKPSENLVA--- 939

  Fly   952 SLKKKQEVEGKLIETEKSQTGGVEFAVYKHYIKSVGIFLSVATLVLNFVFQAFQIGSNLWLTQWA 1016
                ||....|||:||.::||.|:..|:..|:|:||:.:||....|.....|..||:|:||:.|.
 Frog   940 ----KQPPTEKLIQTETTETGRVKMTVFWQYMKAVGLAISVFICFLYSCQNAAAIGANVWLSDWT 1000

  Fly  1017 NDQNVANDTGLRDMYLGVYGAFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFF 1081
            |:..:........|.:|||.|.|..||:|...:...:.:.|..||:.:|:.||...:. :...|:
 Frog  1001 NEPVINQTQQNTQMRVGVYAALGILQGLLVMTSSFSLAIAGIGAARKLHSALLDNKMH-TPQSFY 1064

  Fly  1082 DITPIGRLLNSFSGDMDVVDEELPATMDSFMTFIFMVLATIVVISLSTPIFLAVIVPIAFLYYFA 1146
            |.|||||::|.||.|:.|:||.:|.|:..|:...|..|:|::||..|||:|..||:|:|..|.|.
 Frog  1065 DTTPIGRIINRFSKDIYVIDEVIPGTILMFLATFFTSLSTMIVIVASTPLFAVVIIPLAIAYIFV 1129

  Fly  1147 QRFYVATSRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVI 1211
            |||||||||||.|||||||||||||||||:||||.||||...:.||..||.|||:||...||.::
 Frog  1130 QRFYVATSRQLKRLESVSRSPIYSHFSETITGASIIRAYGRQNSFIVLSDNKVDENQKSYYPGIV 1194

  Fly  1212 ANRWLAIRLEMVGNLIILFASLFAVLGGQ-TNPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIV 1275
            :||||.:|:|.|||.::|||:||||||.: .:|||||||||||||||.:|||:|||:||:|||||
 Frog  1195 SNRWLGVRVEFVGNCVVLFAALFAVLGREHLSPGLVGLSVSYALQVTMSLNWMVRMTSDLETNIV 1259

  Fly  1276 SVERIKEYGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKV 1340
            :|||:|||.|.:.||||.:| |...|::||.:|.||..|:.||||.||||||:.::..:.|||||
 Frog  1260 AVERVKEYAENETEAPWHIE-DTKPPEDWPSKGEVELSNYSVRYRAGLDLVLKNLNLKVNGGEKV 1323

  Fly  1341 GIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINL 1405
            ||||||||||||:||.||||:|.|.|.:.||.|:|:.:||..|||||||||||||||||:||:||
 Frog  1324 GIVGRTGAGKSSMTLCLFRILEPAEGIVKIDNVNISEIGLQDLRSRLTIIPQDPVLFSGTLRMNL 1388

  Fly  1406 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVLVL 1470
            |||...:|||||||||||:||.||....:.|.:|.:||||||||||||||||||||||||::|:|
 Frog  1389 DPFNKYSDDEIWKALELSNLKKFVAGQPSQLEYECSEGGENLSVGQRQLVCLARALLRKTRILIL 1453

  Fly  1471 DEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLDNP 1535
            ||||||:|||||||||.||||:|::|||||||||||||:|..:|:|||||:|.||.:||.|: ..
 Frog  1454 DEATAAIDLETDDLIQMTIRTQFEDCTVLTIAHRLNTIMDYTRVLVLDKGRIAEFDTPTNLI-AL 1517

  Fly  1536 KSAFYSMAKDANL 1548
            |..||.|||||.|
 Frog  1518 KGIFYGMAKDAGL 1530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 786/1561 (50%)
ABC_membrane 338..601 CDD:279056 155/262 (59%)
ABCC_MRP_domain1 649..848 CDD:213217 132/201 (66%)
ABC_membrane 988..1260 CDD:279056 138/272 (51%)
ABCC_MRP_domain2 1308..1528 CDD:213211 156/219 (71%)
abcc3NP_001107301.1 MRP_assoc_pro 7..1530 CDD:188098 786/1565 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I1002
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H68364
Inparanoid 1 1.050 1485 1.000 Inparanoid score I106
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0000087
OrthoInspector 1 1.000 - - otm48865
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8
SonicParanoid 1 1.000 - - X177
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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