DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRP and abcc6b.2

DIOPT Version :9

Sequence 1:NP_723772.2 Gene:MRP / 34686 FlyBaseID:FBgn0032456 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_003198194.2 Gene:abcc6b.2 / 100002917 ZFINID:ZDB-GENE-110208-2 Length:1502 Species:Danio rerio


Alignment Length:1570 Identity:706/1570 - (44%)
Similarity:989/1570 - (62%) Gaps:97/1570 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MDRFCG----STFWNATETWYTNDPDFTPCFEQTALVWTPCAFYWAFVIFDFYYLKASLDRNIPW 69
            ||..|.    ...|:...||||..||.|.||:.|.|||.||.:.|....|...|||...:..|..
Zfish     1 MDTLCSLSGLDPLWDWNVTWYTEHPDLTKCFQHTILVWFPCFYLWICAPFYCLYLKFYYNGRISI 65

  Fly    70 NKLNVSKALVNLGLLVITALDLIMALVKKGGDSE-LPLYDLDVWGPIIKFATFLLLFIFIPLNRK 133
            :.|..:|..:.|.|..|..|:.:..||::..|.| |.::.|   .|||:..|.:|:.:.|.|.|.
Zfish    66 SSLCCAKMGLALCLASIGFLETVYLLVERSRDIEHLMVFLL---SPIIRSLTMILVMLMIHLERL 127

  Fly   134 YGVQTTGCQFIFWFLLTVLSIPRCRTEVRLDAERQKILNSQQPSEQDFSWEEYQFVSFFIFFTFT 198
            .|.:::...|:||.|..|.|:...|.            |.|...::.||.:..:|.:||.||:..
Zfish   128 RGFRSSVFLFLFWMLSVVCSLVPLRA------------NIQANIKEGFSADPMRFAAFFTFFSLQ 180

  Fly   199 SIMLILNCFADGMPRQTKYQRGENEIPELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQ 263
            ...|||:||||..|...|....:|..|...|||||::.:.|:.::.:||||:||:.:|||.||.:
Zfish   181 LAQLILSCFADQRPDTLKPVYVKNPCPVEDASFLSKLLFWWYGRLVVKGYRSPLKAEDLWSLREE 245

  Fly   264 DSCSEVMPIFAHHWNQNVRKNYKNKARVEPKAQFSNGNVTFENPHGEKNGRKKGMASIMPPIY-- 326
            |:..:::......|       .|..|:::.|....|...|.        |.|  ::|.:..::  
Zfish   246 DTSEKIICDLEKEW-------AKQWAKLQQKKSSLNEAQTL--------GFK--LSSCVKQLFRK 293

  Fly   327 ----------------KSFGGVFLFGALMKLFTDTLTFAQPQVLSLIISFVEAQDAEPEWKGILY 375
                            |.|...||.|.|..:..|.|.|:.||||||::.:|..:|| |.|||.|:
Zfish   294 LFKEQCTGFVLFRTLAKIFSPYFLTGTLFLVIQDALMFSIPQVLSLLLGYVRDEDA-PLWKGYLF 357

  Fly   376 AVLLFVLAAAQTFILGQYFHRMFIVGLRIRTALINAIYRKALRISNSTKKESTVGEIVNLMAVDA 440
            |..||:|:..|:....||.:....||:|::||::..:|||:|.|:::.:|..||||||||::.|.
Zfish   358 AFSLFLLSCLQSLFNHQYMYTCLTVGMRVKTAVMGLVYRKSLVINSAARKTCTVGEIVNLVSADT 422

  Fly   441 QRFMELTTYLNMIWSAPLQIGLALYFLWQQLGPSVLAGLAVMIILIPVNGVIASRIKTYQIRQMK 505
            |:.::...|.|.:|.||::|.|.|:||||.||||.|||:..:|::.|:||.||......|..|||
Zfish   423 QKLVDFVMYFNALWLAPIEIALCLFFLWQHLGPSTLAGITTVILIFPLNGFIAKMRSKLQEVQMK 487

  Fly   506 YKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEIATLRSTAYLNAGTSFLWSCAPFLVS 570
            :||||:|||||:|||||:||.||||.:|.::||..|:||:..|:.:..|.:.:...::.:..|::
Zfish   488 HKDERIKLMNEILSGIKILKFYAWEKAFRERVLGYREKELNALKKSQILYSVSIASFNSSTLLIA 552

  Fly   571 LVTFATYVLTSEANQLSVEKVLVSIALFDLMKLPLTILPMLSVDIAETQVSVNRINKFLNSEELD 635
            ...|..|||..:.:.|..:|:.||:||.:::|.||:.||:......:..||:.|:..||:.:||.
Zfish   553 FAMFGVYVLIDDKHVLDAQKIFVSMALINILKAPLSQLPIAMSTTMQVVVSLKRLGTFLDQDELK 617

  Fly   636 PNSVLHDSSKPHPMS--IENGEFSWGDEIT--LRNINIEVKKGSLVALVGTVGSGKSSVVQAFLG 696
            .:||......|:..|  |.||.|||..:.|  ||.||::|::|||||:||.|||||||::.|.||
Zfish   618 LDSVQRVPYNPNIESVVINNGTFSWSKDSTPCLRRINVKVQRGSLVAVVGHVGSGKSSLLSAMLG 682

  Fly   697 EMEKLAGVVNTVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDL 761
            ||||.:|.:...|.:.||||||||||||::||||||.......|.||::||||..|::||.|.|.
Zfish   683 EMEKKSGHITITGSVGYVPQQAWIQNATLKDNILFGCEKKDSLYQKVLEACALLPDLEILPARDA 747

  Fly   762 TEIGEKGINLSGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRV 826
            |||||||:|||||||||:|||||||.::|:|||||||||||||||:||||:||||.|.|..|:||
Zfish   748 TEIGEKGLNLSGGQKQRVSLARAVYRNSDIYLLDDPLSAVDAHVGQHIFEKVIGPNGSLKNKTRV 812

  Fly   827 LVTHGVTFLPQVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQIS 891
            |||||::||||.|.|.|:..|||.|.|::.:|:..|.|||            |.:..:..:|:.|
Zfish   813 LVTHGLSFLPQADLILVMADGEIKEMGSYAELLSRKNAFA------------ELKAFSVSERKES 865

  Fly   892 STADVPELLGTVEKAIKLARTESLSDSISVTSADSLMGGGGSLRRRTKRQDSHDSVASAASLKKK 956
            :|     |.|| .|::...       ||...|.|.:.|..||...:|.      ...|...|.:.
Zfish   866 AT-----LKGT-RKSVSFL-------SIKDFSTDLIRGDLGSASIQTM------EAISDPKLNQD 911

  Fly   957 QEVEGKLIETEKSQTGGVEFAVYKHYIKSVGIFLSVATLVLNFVFQAFQIGSNLWLTQWANDQNV 1021
            ::..|:|.:.:|:.||.|:..:|..|.:::|:...:..:.|....|...:..|.||:.||:|. |
Zfish   912 RDEVGRLTQADKAHTGRVKLEMYVEYFRTIGLAFIIPIIFLYAFQQVASLAYNYWLSLWADDP-V 975

  Fly  1022 ANDTGLR-DMYLGVYGAFGFGQGVLAYFAVVIVYLGGFQAAKTIHNELLAVIIRGSVCRFFDITP 1085
            .|.|.:. |:.||||||.||.||:..:...|.:.|||..|::.:|.:||..::. |...||:.||
Zfish   976 INGTQVNTDLKLGVYGALGFAQGIAIFGTTVAISLGGIIASRQLHLDLLNNVLH-SPMSFFESTP 1039

  Fly  1086 IGRLLNSFSGDMDVVDEELPATMDSFMTFIFMVLATIVVISLSTPIFLAVIVPIAFLYYFAQRFY 1150
            .|.|||.||.::|.:|..:|..:...:.::|.:|...:::.::||....:|:|:..||.|.|.||
Zfish  1040 SGNLLNRFSKEIDAIDCMIPHGLKIMLGYVFKLLEVCIIVLMATPFAGVIILPLTLLYAFIQSFY 1104

  Fly  1151 VATSRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANRW 1215
            ||||.||.|||||||||||:||:|||.|||.|||:....|||.:::.:||.||...:|..:|:||
Zfish  1105 VATSCQLRRLESVSRSPIYTHFNETVQGASVIRAFGEQPRFILQANCRVDLNQTSYFPRFVASRW 1169

  Fly  1216 LAIRLEMVGNLIILFASLFAVLGGQT-NPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVER 1279
            ||:.||.:|||::|.|::.:|:|..| :||.|||:||::||||..|:|:||..:|:|.|||||||
Zfish  1170 LAVNLEFLGNLLVLAAAILSVMGRATLSPGTVGLAVSHSLQVTGILSWIVRSWTDVENNIVSVER 1234

  Fly  1280 IKEYGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKVGIVG 1344
            :|||.||.:||||..| |...|.:||:.|.:.||.:.::||:|||..|:.:|.::...|||||||
Zfish  1235 VKEYAETAKEAPWTFE-DSPLPSDWPRSGSIGFQAYGLQYRKGLDWALKEISLSVNEREKVGIVG 1298

  Fly  1345 RTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINLDPFE 1409
            |||||||||.|.:|||:|||.|:|.|||::||.:|||.||||:|||||||||||||||||||||:
Zfish  1299 RTGAGKSSLALGIFRILEAAKGKIFIDGINIAEIGLHELRSRITIIPQDPVLFSGSLRINLDPFD 1363

  Fly  1410 IKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVLVLDEAT 1474
            ..||:|:|::|||:|||:||..|...||||.:|||||||:|||||:|||||||||||:|||||||
Zfish  1364 RYTDEEVWRSLELAHLKTFVSDLPDKLNHECSEGGENLSLGQRQLICLARALLRKTKILVLDEAT 1428

  Fly  1475 AAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLDNPKSAF 1539
            |||||:||:|||.||||:|::|||||||||||||:|..:|||:|:|.|.|..||:.|: :....|
Zfish  1429 AAVDLKTDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVMDRGNITEIDSPSNLI-SQHGQF 1492

  Fly  1540 YSMAKDANLV 1549
            |.|.::|.||
Zfish  1493 YRMCREAGLV 1502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPNP_723772.2 MRP_assoc_pro 14..1548 CDD:188098 701/1562 (45%)
ABC_membrane 338..601 CDD:279056 114/262 (44%)
ABCC_MRP_domain1 649..848 CDD:213217 130/202 (64%)
ABC_membrane 988..1260 CDD:279056 118/273 (43%)
ABCC_MRP_domain2 1308..1528 CDD:213211 151/219 (69%)
abcc6b.2XP_003198194.2 MRP_assoc_pro 5..1501 CDD:188098 702/1563 (45%)
ABC_membrane 320..587 CDD:294371 115/267 (43%)
ABCC_MRP_domain1 633..834 CDD:213217 129/200 (65%)
ABC_membrane 950..1215 CDD:279056 118/266 (44%)
ABCC_MRP_domain2 1262..1482 CDD:213211 151/219 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586061
Domainoid 1 1.000 229 1.000 Domainoid score I2404
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0000087
OrthoInspector 1 1.000 - - otm24337
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X177
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.760

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