DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6180 and Mrpl38

DIOPT Version :9

Sequence 1:NP_609588.1 Gene:CG6180 / 34683 FlyBaseID:FBgn0032453 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_077139.2 Gene:Mrpl38 / 60441 MGIID:1926269 Length:380 Species:Mus musculus


Alignment Length:253 Identity:66/253 - (26%)
Similarity:107/253 - (42%) Gaps:42/253 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RKDYIRSTGVNVNYSAVNFPAAIRTLKTFSNSILTKEPKPIFAFIASQRQYSCEKVGK--TMEEH 83
            ||.::|....||.....   |.:||...           |:.| :.::.:.:|....|  ..|.:
Mouse   106 RKHFLRELRANVEEERA---ARLRTASI-----------PLEA-VRAEWERTCGPYHKQRLAEYY 155

  Fly    84 CVVPDVIAKA------PAQTAVVEYPGDIV-VKPGQVLTPTQVKDEPCVKWEADANKLYTLC--- 138
            .:..|:...|      |...|......|:: |..|..:|||:....|.|.:|||.:.|:||.   
Mouse   156 GLYRDLFHGATFVPWVPLHVAYAVGEEDLIPVYHGNEVTPTEASRAPEVTYEADKDSLWTLLFIN 220

  Fly   139 ----MTDPDAPSRKDPKFREWHHWLVGNIPGGDVAKGEVLSAYVGSGPPPDTGLHRYVFLIYEQR 199
                :.:|||         |:.|||:.|||...||:|:....|:...|...:|.||:.||:::|.
Mouse   221 LDGHLLEPDA---------EYVHWLLTNIPSNRVAEGQETCPYLPPFPARGSGFHRFAFLLFKQD 276

  Fly   200 CKLTFDEKRLPNNSGD-GRGGFKIAEFAKKYALGNPIAG-NLYQAEYDDYVPILYKQL 255
            ..:.|.|...|:.... .:..|:..:|.|::......|| ..:|..:||.|...:.||
Mouse   277 KPINFSEDTRPSPCYQLAQRTFRTFDFYKRHQEAMTPAGLAFFQCRWDDSVTHTFHQL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6180NP_609588.1 PEBP_euk 100..242 CDD:176644 43/151 (28%)
Mrpl38NP_077139.2 PEBP_euk 171..321 CDD:176644 45/158 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1881
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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