DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6180 and Mrpl38

DIOPT Version :10

Sequence 1:NP_609588.1 Gene:CG6180 / 34683 FlyBaseID:FBgn0032453 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001009369.2 Gene:Mrpl38 / 303685 RGDID:1311180 Length:380 Species:Rattus norvegicus


Alignment Length:159 Identity:51/159 - (32%)
Similarity:75/159 - (47%) Gaps:18/159 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IVVKPGQVLTPTQVKDEPCVKWEADANKLYTLC-------MTDPDAPSRKDPKFREWHHWLVGNI 163
            |.|..|..:|||:....|.|.:|||.:.|:||.       :.:|||         |:.||||.||
  Rat   185 IPVYHGNEVTPTEASQAPEVTYEADKDSLWTLLFINLDGHLLEPDA---------EYLHWLVTNI 240

  Fly   164 PGGDVAKGEVLSAYVGSGPPPDTGLHRYVFLIYEQRCKLTFDEKRLPNNSGD-GRGGFKIAEFAK 227
            |...||:|:....|:...|...:|.||:.||:::|...:.|.|...|:.... .:..|...:|.|
  Rat   241 PSNRVAEGQESCPYLPPFPARGSGFHRFAFLLFKQDKPINFSEDTRPSPCYQLAQRTFHTLDFYK 305

  Fly   228 KYALGNPIAG-NLYQAEYDDYVPILYKQL 255
            |:......|| ..:|..:||.|...:.||
  Rat   306 KHQEAMTPAGLAFFQCRWDDSVTHTFHQL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6180NP_609588.1 PEBP_euk 100..242 CDD:176644 45/144 (31%)
Mrpl38NP_001009369.2 PEBP_euk 171..321 CDD:176644 45/144 (31%)

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