DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6180 and Pbp2

DIOPT Version :10

Sequence 1:NP_609588.1 Gene:CG6180 / 34683 FlyBaseID:FBgn0032453 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001099226.1 Gene:Pbp2 / 246145 RGDID:621707 Length:187 Species:Rattus norvegicus


Alignment Length:168 Identity:98/168 - (58%)
Similarity:118/168 - (70%) Gaps:2/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 IAKAPAQTAVVEYPGDIVVKPGQVLTPTQVKDEP-CVKWEA-DANKLYTLCMTDPDAPSRKDPKF 152
            :.:.|.....|.|.|..|.:.||||||||||:.| .:.|:. |..|||||.:|||||||||:|.:
  Rat    17 VDEQPQHLLRVTYAGAEVSELGQVLTPTQVKNRPSSITWDGLDPGKLYTLILTDPDAPSRKEPIY 81

  Fly   153 REWHHWLVGNIPGGDVAKGEVLSAYVGSGPPPDTGLHRYVFLIYEQRCKLTFDEKRLPNNSGDGR 217
            |||||:||.|:.|.|::.|:|||.|||||||..|||||||:|:|:|...|..||..|.|.||:.|
  Rat    82 REWHHFLVVNMKGNDISSGKVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLKCDEPILTNRSGNQR 146

  Fly   218 GGFKIAEFAKKYALGNPIAGNLYQAEYDDYVPILYKQL 255
            |.||.|.|.|||.||.|:||..||||:|.|||.|||||
  Rat   147 GKFKAAAFRKKYHLGAPVAGTCYQAEWDSYVPKLYKQL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6180NP_609588.1 PEBP_euk 100..242 CDD:176644 85/143 (59%)
Pbp2NP_001099226.1 PEBP_euk 23..171 CDD:176644 85/147 (58%)

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