DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6180 and Pebp1

DIOPT Version :10

Sequence 1:NP_609588.1 Gene:CG6180 / 34683 FlyBaseID:FBgn0032453 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_061346.2 Gene:Pebp1 / 23980 MGIID:1344408 Length:187 Species:Mus musculus


Alignment Length:165 Identity:102/165 - (61%)
Similarity:121/165 - (73%) Gaps:3/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 PAQTAV-VEYPGDIVVKPGQVLTPTQVKDEP-CVKWEA-DANKLYTLCMTDPDAPSRKDPKFREW 155
            |.|.|: |:|.|..|.:.|:|||||||.:.| .:.|:. |..|||||.:||||||||||||||||
Mouse    20 PPQHALRVDYAGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREW 84

  Fly   156 HHWLVGNIPGGDVAKGEVLSAYVGSGPPPDTGLHRYVFLIYEQRCKLTFDEKRLPNNSGDGRGGF 220
            ||:||.|:.|.|::.|.|||.|||||||..|||||||:|:|||...|:.||..|.|.|||.||.|
Mouse    85 HHFLVVNMKGNDISSGTVLSDYVGSGPPSGTGLHRYVWLVYEQEQPLSCDEPILSNKSGDNRGKF 149

  Fly   221 KIAEFAKKYALGNPIAGNLYQAEYDDYVPILYKQL 255
            |:..|.|||.||.|:||..||||:|||||.||:||
Mouse   150 KVETFRKKYNLGAPVAGTCYQAEWDDYVPKLYEQL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6180NP_609588.1 PEBP_euk 100..242 CDD:176644 87/143 (61%)
Pebp1NP_061346.2 PEBP_euk 25..171 CDD:176644 87/145 (60%)
Interaction with RAF1. /evidence=ECO:0000250 93..134 25/40 (63%)

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