DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6180 and mrpl-38

DIOPT Version :10

Sequence 1:NP_609588.1 Gene:CG6180 / 34683 FlyBaseID:FBgn0032453 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_490808.1 Gene:mrpl-38 / 171682 WormBaseID:WBGene00021327 Length:413 Species:Caenorhabditis elegans


Alignment Length:165 Identity:49/165 - (29%)
Similarity:75/165 - (45%) Gaps:8/165 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 QTAVVEYPGDIVVKPGQVLTPTQVKDEPCVKWEADAN--KLYTLCMTDPDAPSRKDPKFREWHHW 158
            |...|.:..||||..|.|:|.......|.:..|:..|  ...||.|.:.|..:....|..|...|
 Worm   155 QNLQVNFENDIVVHSGNVITANSTLKRPEITIESVGNGGGFNTLLMINLDGNALDLGKNGEIVQW 219

  Fly   159 LVGNIPGGD-VAKGEVLSAYVGSGPPPDTGLHRYVFLIYEQRCKLTFDEKRLPNNSGDGRGGFKI 222
            ::.|||.|: ::.|..:..|:...|...||.||..|:::.....:.|   ::..||.|.| ..:|
 Worm   220 MISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVLFRHEKPVDF---QIQGNSLDTR-IHEI 280

  Fly   223 AEFAKKY-ALGNPIAGNLYQAEYDDYVPILYKQLG 256
            ::|.||: |...|.|...:|..||:.|.:....||
 Worm   281 SKFYKKHEATITPSAIRFFQTSYDNSVKMALHGLG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6180NP_609588.1 PEBP_euk 100..242 CDD:176644 42/145 (29%)
mrpl-38NP_490808.1 PEBP_euk 156..301 CDD:176644 42/148 (28%)

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