DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15484 and squ

DIOPT Version :9

Sequence 1:NP_609587.1 Gene:CG15484 / 34682 FlyBaseID:FBgn0032452 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001246044.1 Gene:squ / 2768920 FlyBaseID:FBgn0267347 Length:241 Species:Drosophila melanogaster


Alignment Length:216 Identity:101/216 - (46%)
Similarity:142/216 - (65%) Gaps:22/216 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWVPTSRFEHDLVQLEPHFNLVHGQIAYELRKKEEFSESVPIHTYELLTAREDLLG-----YGT 60
            |||||.|:||.|||.:||.||.||||:||:::|:.||... |..|||.|.:||....     :|:
  Fly     1 MAWVPNSQFEDDLVDMEPDFNFVHGQLAYDMKKQGEFWPR-PKCTYEYLKSREKRNSELENIHGS 64

  Fly    61 RGGKGREIRQSLQMMETIQRVAGTKPLGEHATMEDWEDTTMVDVEAIAIIRNFGRMTLKQDSLTL 125
            |||.||:||||||:||.||::|||:||||||||:||||.:..::||:|::|:||.|::..|||.:
  Fly    65 RGGTGRDIRQSLQLMENIQKIAGTRPLGEHATMKDWEDESTNELEALAMMRHFGMMSMATDSLPV 129

  Fly   126 QPQISLP----AVAPNESQRFPLITDRDFFTPRKIRRPKDLPPVENSPDNSADDSFHTAKS--LS 184
            .|::..|    .:..|..::||||||.:||.||||.|.|         ::|:..|:|||.|  .|
  Fly   130 LPEVKPPEGPIKIIRNGRKQFPLITDPEFFKPRKIPRTK---------NSSSSSSYHTANSSISS 185

  Fly   185 NCIWLNGLKYPDKTSK-GEIQ 204
            ..::.:.....|.:.| |||:
  Fly   186 FSLYESAASDLDSSKKQGEIK 206



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452922
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BXVF
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0019400
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.830

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