DRSC/TRiP Functional Genomics Resources

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Protein Alignment spict and AT5G11960

DIOPT Version :10

Sequence 1:NP_001260421.1 Gene:spict / 34681 FlyBaseID:FBgn0032451 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_196757.2 Gene:AT5G11960 / 831069 AraportID:AT5G11960 Length:344 Species:Arabidopsis thaliana


Alignment Length:343 Identity:74/343 - (21%)
Similarity:121/343 - (35%) Gaps:113/343 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ETAPLSMAETVSNTDFYIGVGLAISSCFFIGSSFIIKKKALIRLS----RYGEVRASAGGFGYLR 90
            |:..|::|.|..|.               ||.  :::||..|.|.    :...:||      |..
plant     3 ESICLTLAATAGNN---------------IGK--VLQKKGTIILPPLSLKLKVLRA------YAE 44

  Fly    91 EWIWWAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLCI 155
            ...|..|.|...||......|.:.||.|:|.|:....:.|.:|.:..:|.|.:|:...||..:..
plant    45 NKPWALGFLMDIVGALLMLRALSLAPVSVVQPVSGCGLAILSVFSHFYLKEVMNVFDWIGITVAG 109

  Fly   156 LGSTIIVIHSPKEKE---IEDLQLLFDMLLDPVFILYVI-------------------------C 192
            :| ||.|....:|:|   |...|||:..|:  |.||:|:                         .
plant   110 IG-TIGVGAGGEEQEASLISVFQLLWLALV--VAILFVLLNAWLHIFKRQRREQELGEYEVVEEI 171

  Fly   193 IVG----------STVFVACFIAPRHGHTNVVVYIFL-----CSGIG------------SLTVMS 230
            |.|          |.|....|:....|.:.:.:.:.:     |||.|            ::.|.:
plant   172 IYGLESGILFGMASVVSKMGFVFVEQGFSTMFIPMCISISICCSGTGFFYQTRGLKHGRAIVVST 236

  Fly   231 CKALG----------LAIRQTL--NNGGNVFLTWMPWFLILVTV---------------TFIAIQ 268
            |.|:.          .|:.:.|  :..|.:.|. :.|.||::.|               :|...:
plant   237 CAAVASIVTGVVAGMFALGEKLPTSPSGRLLLL-LGWLLIMLGVVLLVTSSRLIRHLPRSFRRSR 300

  Fly   269 MNYLNKALDIFNTSIVTP 286
            ...|.:..:|..|:..||
plant   301 QTSLERGFNIRRTTSHTP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spictNP_001260421.1 Mg_trans_NIPA 43..338 CDD:398984 69/330 (21%)
AT5G11960NP_196757.2 TMEM234 <46..113 CDD:481150 19/67 (28%)
RhaT <48..258 CDD:440461 47/212 (22%)

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