DRSC/TRiP Functional Genomics Resources

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Protein Alignment spict and AT4G13800

DIOPT Version :10

Sequence 1:NP_001260421.1 Gene:spict / 34681 FlyBaseID:FBgn0032451 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_567411.1 Gene:AT4G13800 / 827014 AraportID:AT4G13800 Length:336 Species:Arabidopsis thaliana


Alignment Length:304 Identity:153/304 - (50%)
Similarity:214/304 - (70%) Gaps:11/304 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWIWWAGLLTMGVGEAANFAAY 112
            ||.||:||..|||||||||||.|.:....| .||..||:|||.|..||||::||.|||.||||||
plant    11 GVILAVSSSIFIGSSFIIKKKGLKKAGVSG-ARAGEGGYGYLYEPWWWAGMITMIVGEIANFAAY 74

  Fly   113 AFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLCILGSTIIVIHSPKEKEIEDLQLL 177
            |||||.|||||||||:|.|||:|...|.|||::.|.:||.||::|||.||:|:|.|:.||.::.:
plant    75 AFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVLCVVGSTTIVLHAPHEQGIESVKQV 139

  Fly   178 FDMLLDPVFILY---VICIVGSTVFVACFIAPRHGHTNVVVYIFLCSGIGSLTVMSCKALGLAIR 239
            :.:..:|.|:.|   |:.:|.:.:|   :..||:|.|:::||:.:||.:|||||||.||:.:||:
plant   140 WHLATEPGFLAYSAVVLVVVLALIF---YYEPRYGKTHMIVYVGICSLMGSLTVMSVKAVAIAIK 201

  Fly   240 QTLNNGGNVFLTWMPW-FLILVTVTFIAIQMNYLNKALDIFNTSIVTPVYYVMFTTLVIAASAIL 303
            .|. :|.|.|..:..| |:|:||:..| :|:||||||||.|||::::|||||||||..|.||.|:
plant   202 LTF-SGMNQFKYFHAWIFIIVVTICCI-LQINYLNKALDNFNTAVISPVYYVMFTTFTILASMIM 264

  Fly   304 FKEFTHMRFDDILGDVCGFLIVITAVFLLNAFRDIDISLNDVRG 347
            ||::.......|..::|||:.:::..|||:..:|:..| ..:||
plant   265 FKDWASQSGLQIATELCGFVTILSGTFLLHKTKDMGNS-TSLRG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spictNP_001260421.1 Mg_trans_NIPA 43..338 CDD:398984 149/293 (51%)
AT4G13800NP_567411.1 Mg_trans_NIPA 7..299 CDD:398984 149/293 (51%)

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