DRSC/TRiP Functional Genomics Resources

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Protein Alignment spict and Nipal3

DIOPT Version :10

Sequence 1:NP_001260421.1 Gene:spict / 34681 FlyBaseID:FBgn0032451 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001414521.1 Gene:Nipal3 / 502990 RGDID:1563439 Length:410 Species:Rattus norvegicus


Alignment Length:353 Identity:104/353 - (29%)
Similarity:180/353 - (50%) Gaps:46/353 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DG-EASSLQMPQVTVGGMLPVEANQSPETAPLSMAE-TVSNTDFYIGVGLAISSCFFIGSSFIIK 66
            || .::.||:..::     |.....||.   ||..| :.|..:..||..|||.....:..:..::
  Rat     2 DGAHSAGLQLQPLS-----PTSGATSPS---LSSGEGSFSYKENLIGALLAIFGHLVVSIALNLQ 58

  Fly    67 KKALIRLSRYGEVRASAGGFGYLREWIWWAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIIS 131
            |...|||:...:.||      |.:...||.|||.:.:||...||:|||||.||:.||.|:|||.|
  Rat    59 KYCHIRLAGSKDPRA------YFKTKTWWLGLLLLLLGELGVFASYAFAPLSLIVPLSAVSVIAS 117

  Fly   132 AVMASRFLNEKLN--------LLGKIGCFLCILGSTIIVIHSPKEKEIEDLQLLFDMLLDPVFIL 188
            |::...|:.||..        :|..:||.|.|:|:.::|..:|...|....:.:...|:...|:|
  Rat   118 AIIGIIFIKEKWKPKDFVRRYVLSFVGCGLAIVGTYLLVTFAPNSHEKMTGENIARHLVSWPFLL 182

  Fly   189 YVICIVGSTVFVACFIAPRHGHTNVVVYIFLCSGIGSLTVMSCKAL-GLAIRQTLNNGGNVFLTW 252
            |::..:.....:..|...::.: ::||.:.|.:.:||:||::.||: |:.:   |:..||:.|.:
  Rat   183 YMLVAIVLFCLLLYFYKEKNAN-SIVVILLLVALLGSMTVVTVKAVAGMLV---LSIQGNLQLDY 243

  Fly   253 MPWFLILVTVTFIAI-QMNYLNKALDIFNTSIVTPVYYVMFTTLVIAASAILFKEFTHMRFDDIL 316
            ..::::.|.:...|| |..:|::|..|:::|::..|.|::.||:.|.|.:|.:.:|        |
  Rat   244 PIFYVMFVCMVATAIYQATFLSQASQIYDSSLIASVGYILSTTVAITAGSIFYLDF--------L 300

  Fly   317 GD----VC----GFLIVITAVFLLNAFR 336
            |:    :|    |.||....|||:...|
  Rat   301 GEEALHICMFALGCLIAFLGVFLITRNR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spictNP_001260421.1 Mg_trans_NIPA 43..338 CDD:398984 93/312 (30%)
Nipal3NP_001414521.1 None

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