DRSC/TRiP Functional Genomics Resources

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Protein Alignment spict and nipal3

DIOPT Version :10

Sequence 1:NP_001260421.1 Gene:spict / 34681 FlyBaseID:FBgn0032451 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001002634.3 Gene:nipal3 / 436907 ZFINID:ZDB-GENE-040718-379 Length:393 Species:Danio rerio


Alignment Length:321 Identity:96/321 - (29%)
Similarity:165/321 - (51%) Gaps:39/321 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSMAE-----TVSNTDFYIGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWI 93
            :|||:     |.|.||..||..|||.....:..|..|:|::.:.|:...:.|.      |.....
Zfish    10 VSMAQKDGMMTDSYTDNLIGTLLAIFGNLLVSISVSIQKQSHVTLAGNKDPRQ------YYYTKT 68

  Fly    94 WWAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLN--------LLGKIG 150
            ||.||:.|.:||.|.|.:|||||.||:.||.|:|||.|:::...||.||..        :|..:|
Zfish    69 WWLGLVLMVLGEGALFVSYAFAPLSLIAPLNAVSVISSSILGFLFLREKWKAQEFLQRYILTFLG 133

  Fly   151 CFLCILGSTIIVIHSPKEKEIEDLQLLFDMLLDPVFILYVICIVGSTVFVACFIAPRHGHTN--- 212
            |.:...|:.:.|...|...|..:.:.:...::...|:||:  ::|...|  |.:...:...|   
Zfish   134 CAMTAGGTYLFVTFGPNSHEKLNAENIVKHVISWPFLLYL--LLGIIAF--CLVLYYYKQRNANY 194

  Fly   213 VVVYIFLCSGIGSLTVMSCKAL-GLAIRQTLNNGGNVFLTWMPWFLILV-TVTFIAIQMNYLNKA 275
            :|:.:.|.:.:||:||::.||: |:.:   |:..|.:.|::..::::.| .|..|..|.::|.:|
Zfish   195 LVLILLLVALLGSVTVITVKAVSGMIV---LSIVGPLQLSYPIFYVMFVCMVATIVFQASFLAQA 256

  Fly   276 LDIFNTSIVTPVYYVMFTTLVIAASAILFKEFTHMRFDDILGDVCGFL----IVITAVFLL 332
            ..::::|::..|.|:..||..|...|:.::||.|   :|:| .:|.||    |....|||:
Zfish   257 SHLYDSSLIACVNYIFCTTFAIGGGAVFYQEFNH---EDVL-HICLFLLGCAICFLGVFLI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spictNP_001260421.1 Mg_trans_NIPA 43..338 CDD:398984 91/307 (30%)
nipal3NP_001002634.3 None

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