DRSC/TRiP Functional Genomics Resources

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Protein Alignment spict and Nipal2

DIOPT Version :10

Sequence 1:NP_001260421.1 Gene:spict / 34681 FlyBaseID:FBgn0032451 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001124031.1 Gene:Nipal2 / 362899 RGDID:1564315 Length:383 Species:Rattus norvegicus


Alignment Length:360 Identity:103/360 - (28%)
Similarity:170/360 - (47%) Gaps:35/360 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PETAPLSMAETVSNTDFYIGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWI 93
            |....||.|....|.....||.|||.....|..|..|:|.:.:.|::....:.      |.:..:
  Rat    31 PSNGSLSSAWYHRNQIHLFGVLLAILGNLVISISLNIQKYSHLHLAQKEHPKP------YFKSVL 89

  Fly    94 WWAGLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLCILGS 158
            |.:|:|.|.:||..|||||..||.:|:.|||.:||..|||::..||.|.|.....:|..|...|:
  Rat    90 WLSGVLLMAIGETGNFAAYGVAPITLIAPLGCVSVTGSAVISVIFLKENLRASDLLGMTLAFAGT 154

  Fly   159 TIIVIHSPKEKEIEDLQLLFDMLLDPVFILYVICIVGSTVFVAC---FIAPRHGHTNVVVYIFLC 220
            .::|..:|...:....:.:....:...|::|:|.    .:.|.|   :...|.|..::|:.:.|.
  Rat   155 YLLVNFAPNITQAISARTIQYYFVGWQFLVYMIL----EILVFCILLYFHKRKGKKHIVILLTLV 215

  Fly   221 SGIGSLTVMSCKALGLAIRQTLNNGGNVFLTWMPWFLILV-TVTFIAIQMNYLNKALDIFNTSIV 284
            :.:.||||:|.||:...|  ||:..|.:.||:..::::|| .:.....|:.:||:|.:::..:.|
  Rat   216 ALLASLTVISVKAVSGMI--TLSVTGKMQLTYAIFYIMLVIMIASCVFQVKFLNQATELYTMTTV 278

  Fly   285 TPVYYVMFTTLVIAASAILFKEFTHMRFDDILGDVCGFLIVITAVFLLNAFRDID------ISLN 343
            .||.:|.|||..|.|..|.::||....|..:...:.|..:....|||:...|:.:      |...
  Rat   279 VPVNHVFFTTSAIIAGIIFYQEFLGAAFLTVFIYLFGCFLSFLGVFLVTRNREREYLQQSFIDFG 343

  Fly   344 DVRGLMRPKMQRVSQFDEEVLVTSNTKERRLSYGS 378
            ::.|         .|..:::...||    .|||||
  Rat   344 NIPG---------KQMLDKIQPDSN----GLSYGS 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spictNP_001260421.1 Mg_trans_NIPA 43..338 CDD:398984 88/298 (30%)
Nipal2NP_001124031.1 Mg_trans_NIPA 45..331 CDD:398984 87/297 (29%)

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