DRSC/TRiP Functional Genomics Resources

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Protein Alignment spict and Nipa2

DIOPT Version :10

Sequence 1:NP_001260421.1 Gene:spict / 34681 FlyBaseID:FBgn0032451 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_001100988.1 Gene:Nipa2 / 308667 RGDID:1306051 Length:359 Species:Rattus norvegicus


Alignment Length:334 Identity:175/334 - (52%)
Similarity:232/334 - (69%) Gaps:1/334 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DFYIGVGLAISSCFFIGSSFIIKKKALIRLSRYGEVRASAGGFGYLREWIWWAGLLTMGVGEAAN 108
            |||||:|||::|..|||.|||:|||.|:||:|.|.:||..||..||:||:||||||:||.||.||
  Rat     9 DFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVAN 73

  Fly   109 FAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLCILGSTIIVIHSPKEKEIED 173
            |||||||||:||||||||||::||:::|.||||:|||.|||||.|.|||||::|||:|||:|||.
  Rat    74 FAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIET 138

  Fly   174 LQLLFDMLLDPVFILYVICIVGSTVFVACFIAPRHGHTNVVVYIFLCSGIGSLTVMSCKALGLAI 238
            |..:...|.||.|:::...:|...:.....:.||||.||::|||.:||.||:.:|...|.||:.|
  Rat   139 LNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITI 203

  Fly   239 RQTLNNGGNVFLTWMPWFLILVTVTFIAIQMNYLNKALDIFNTSIVTPVYYVMFTTLVIAASAIL 303
            ::.| .|..|....:.|.|:|..|..::.|:||||:||||||||||||:|||.|||.|:..||||
  Rat   204 KELL-AGKPVLQHPLAWILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAIL 267

  Fly   304 FKEFTHMRFDDILGDVCGFLIVITAVFLLNAFRDIDISLNDVRGLMRPKMQRVSQFDEEVLVTSN 368
            |||:..|..||::|.:.||..:|..:|||:||:|:..||..:....|...:.|:.....:....|
  Rat   268 FKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLN 332

  Fly   369 TKERRLSYG 377
            ..|..|..|
  Rat   333 NNEEDLPCG 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spictNP_001260421.1 Mg_trans_NIPA 43..338 CDD:398984 166/293 (57%)
Nipa2NP_001100988.1 Mg_trans_NIPA 8..302 CDD:398984 166/293 (57%)

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