Protein Alignment CG5776 and AtCDC48B

DIOPT Version :10

• Sequence 1: NP_609585.1
• Gene: CG5776 / 34680
• FlyBaseID: FBgn0032450
• Length: 799
• Species: Drosophila melanogaster
• Sequence 2: NP_190891.1
• Gene: AtCDC48B / 824489
• AraportID: AT3G53230
• Length: 815
• Species: Arabidopsis thaliana
• Alignment Length: 783
• Identity: 237/783 - (30%)
• Similarity: 406/783 - (51%)
• Gaps: 131/783 - (16%)

  Fly    82 NMLVFVSEGAMQLAQLHIGQHVVLE------------APSTAEQPLVRIVWPTSEQFLTTVFVSE 134
            |.:|.:....|:..||..|..::::            |..|.::|.:|:
plant    41 NSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCDEPKIRM---------------- 89

  Fly   135 GDFKLHCTQLRGKLLKISALHP-------SRLTAAASISLKHVNTTETSLKSVQLQDAIALLKRD 192
              .|:..:.||.:|..:.::|.       :|:         |:...:.:::.|......|.||..
plant    90 --NKVVRSNLRVRLGDVISVHQCPDVKYGNRV---------HILPLDDTIEGVSGNIFDAYLKPY 143

  Fly   193 MVN--RVFYKDSLIHMNFFNKSLTFRLERWQSTVEEALAGLSLDSKPLQFIQVTNVTKLHLITDD 255
            .:.  |...|..|..:....:|:.|::               :::.|.::..|...|::....:.
plant   144 FLEAYRPVRKGDLFLVRGGMRSIEFKV---------------IETDPAEYCVVAPDTEIFCEGEP 193

  Fly   256 ANQQEEEQKISHRITKCQIGGLDRQLQLVEESMEYALG----FRTLPAGLRVSRGLLLYGATGCG 316
            ..:::||:  ...:....:||:.:|:..:.|.:|..|.    |:::  |::..:|:||||..|.|
plant   194 IKREDEER--LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI--GVKPPKGILLYGPPGSG 254

  Fly   317 KSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVH 381
            |:::..   |||.|..   .....||..|:.||..||:|..|...||.|..:  .|:::.|:::.
plant   255 KTLIAR---AVANETG---AFFFCINGPEIMSKLAGESESNLRKAFEEAEKN--APSIIFIDEID 311

  Fly   382 NLCPKQE--NSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEV 444
            ::.||:|  :.::.:|:....|:|:|.|.|.:.:     .|:..:::.:::.|::||.||.|.|:
plant   312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHV-----IVMGATNRPNSIDPALRRFGRFDREI 371

  Fly   445 ELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQAQPNPLQM-- 507
            ::|.|....|||::|...|::: ...|.::|.|:..||||||||||.|...|.||.....:.:
plant   372 DIGVPDEIGRLEVLRIHTKNMK-LAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVID 435

  Fly   508 ------------------PHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWP 554
                              .|.|.||....|||:||.::|.|||.|.||||...::..:|:.:::|
plant   436 LDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYP 500

  Fly   555 LLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVRE 619
            :.|.:||::.|:.|.:|:|.:|||||.||::|||:|.|.:.||:|||||||.:||.||||..|||
plant   501 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565

  Fly   620 VFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATN 684
            :|.||||.||.::||||:|:|..:|....|.:.|::  :|||.|||||:||:.|.:.|.|:.|||
plant   566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAA--DRVLNQLLTEMDGMNAKKTVFIIGATN 628

  Fly   685 RPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQA 749
            |||:||.|||||||:|:::|:.||..|:|.:|.|..||..|::.|||:..|.:.|:|:|||:|..
plant   629 RPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITE 693

  Fly   750 VCHEAALRALEQSFEAE----------------------DVKWTDFEHALKAVPPRTSPELLKLY 792
            :|..:...|:.::.|.:                      ::|...||.::|......|...::.|
plant   694 ICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKY 758

  Fly   793 EDY 795
            :.:
plant   759 QAF 761

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5776	NP_609585.1	CDC48	183..797	CDD:273521	219/663 (33%)
AtCDC48B	NP_190891.1	CDC48	30..767	CDD:273521	237/783 (30%)